RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ZNF525Q8N782 197 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 OR2V2Q96R30 315 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 PMCHL2Q9BQD1 86 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 SPCS1Q9Y6A9 102 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 WIPF3A6NGB9 483 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 FAM216AQ8WUB2 273 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 PKIBQ9C010 78 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 PILRBQ9UKJ0 227 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 TSC2P49815 1807 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 PATJQ8NI35 1801 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 TMEM265A0A087WTH1 108 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 MUC21A0A0G2JKD1 596 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 MUC21A0A140T8X8 626 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 C16orf97H3BN30 126 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 RFPL3SP0C7P2 107 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 MUC21Q5SSG8 566 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 SSBP3Q9BWW4 388 aaPredicted RBP13.59□□□□□ -0.23
NPHP3-201ENST00000337331 AMMECR1Q9Y4X0 333 aaPredicted RBP13.59□□□□□ -0.23
NPHP3-201ENST00000337331 OR51B2Q9Y5P1 312 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 DOCK10Q96BY6 2186 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 RBFOX2O43251 390 aaKnown RBP eCLIP13.58□□□□□ -0.232e-10■■■■■ 36.9
NPHP3-201ENST00000337331 TEX43Q6ZNM6 134 aa13.58□□□□□ -0.23
NPHP3-201ENST00000337331 SAXO1Q8IYX7 474 aa13.58□□□□□ -0.23
NPHP3-201ENST00000337331 SMIM17P0DL12 118 aa13.58□□□□□ -0.24
NPHP3-201ENST00000337331 PLAURQ03405 335 aa13.58□□□□□ -0.24
NPHP3-201ENST00000337331 RPP25LQ8N5L8 163 aaKnown RBP13.58□□□□□ -0.24
NPHP3-201ENST00000337331 CHCHD2Q9Y6H1 151 aaPredicted RBP13.58□□□□□ -0.24
NPHP3-201ENST00000337331 ZIC3O60481 467 aa13.58□□□□□ -0.24
NPHP3-201ENST00000337331 FOXA3P55318 350 aaPredicted RBP13.58□□□□□ -0.24
NPHP3-201ENST00000337331 SEPSECSQ9HD40 501 aaKnown RBP13.58□□□□□ -0.24
NPHP3-201ENST00000337331 PLXND1Q9Y4D7 1925 aa13.58□□□□□ -0.24
NPHP3-201ENST00000337331 CORTO00230 105 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 PAX2Q02962 417 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 MIC13Q5XKP0 118 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 LINC01551Q86U37 167 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ITLN1Q8WWA0 313 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 CLEC5AQ9NY25 188 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ELOVL5Q9NYP7 299 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ALPK3Q96L96 1907 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 SCO2A0A1W2PP80 73 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ZG16O60844 167 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ARL14EPLP0DKL9 152 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 NMUP48645 174 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ID3Q02535 119 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 C5orf17Q8NAS9 161 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 OR8A1Q8NGG7 326 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 RASL11BQ9BPW5 248 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 RAB1BQ9H0U4 201 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 MPDU1O75352 247 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 CKS1BP61024 79 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 IBA57Q5T440 356 aaKnown RBP13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ZNF837Q96EG3 531 aaPredicted RBP13.57□□□□□ -0.24
NPHP3-201ENST00000337331 SLC25A10Q9UBX3 287 aaPredicted RBP13.57□□□□□ -0.24
NPHP3-201ENST00000337331 GFRA1P56159 465 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 NFAM1Q8NET5 270 aaPredicted RBP13.57□□□□□ -0.24
NPHP3-201ENST00000337331 STXBP6Q8NFX7 210 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 OR2K2Q8NGT1 345 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 OCC1Q8TAD7 63 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 FAM222BQ8WU58 562 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 MYO7BQ6PIF6 2116 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 CSRP1P21291 193 aaKnown RBP13.56□□□□□ -0.24
NPHP3-201ENST00000337331 ZNF645Q8N7E2 425 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 FLVCR1-AS1Q8TAF5 88 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 CRIM1Q9NZV1 1036 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 FBLN5Q9UBX5 448 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 TM4SF20Q53R12 229 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 PERPQ96FX8 193 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 MRPS16Q9Y3D3 137 aaKnown RBP13.56□□□□□ -0.24
NPHP3-201ENST00000337331 ABCA4P78363 2273 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 PPIAL4EA0A075B759 164 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 IGKV1-9A0A0C4DH69 117 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 PPIAL4FP0DN26 164 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 GCSHP23434 173 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 ACP1P24666 158 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 KLF14Q8TD94 323 aaPredicted RBP13.56□□□□□ -0.24
NPHP3-201ENST00000337331 TMUB1Q9BVT8 246 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 ARHGAP21Q5T5U3 1957 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 AMY1AP04745 511 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 QRFPP83859 136 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 PPP1R32Q7Z5V6 425 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 JKAMPQ9P055 326 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 IL36RNQ9UBH0 155 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 TRBV9A0A0B4J1U6 114 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 IGHV3-72A0A0B4J1Y9 119 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 IGHV2-70DA0A0C4DH43 119 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 CEACAM18A8MTB9 384 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 FOXL1Q12952 345 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 ZNF658BQ4V348 819 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-201ENST00000337331 DRAM1Q8N682 238 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 TMEM54Q969K7 222 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 CHTOPQ9Y3Y2 248 aaKnown RBP13.55□□□□□ -0.24
NPHP3-201ENST00000337331 FAM90A26D6RGX4 464 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 PLAUP00749 431 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 ESDP10768 282 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 LTBRP36941 435 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 OR10AG1Q8NH19 301 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 PRSS1P07477 247 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 GPR6P46095 362 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-201ENST00000337331 F11RQ9Y624 299 aaKnown RBP13.55□□□□□ -0.24
NPHP3-201ENST00000337331 TTC28Q96AY4 2481 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms