RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 PSMB6P28072 239 aa17■□□□□ 0.31
TPM1-204ENST00000334895 RPL27AP46776 148 aaKnown RBP17■□□□□ 0.31
TPM1-204ENST00000334895 OR10W1Q8NGF6 305 aa17■□□□□ 0.31
TPM1-204ENST00000334895 HINT2Q9BX68 163 aa17■□□□□ 0.31
TPM1-204ENST00000334895 C11orf1Q9H5F2 150 aa17■□□□□ 0.31
TPM1-204ENST00000334895 TEX22C9J3V5 150 aa16.99■□□□□ 0.31
TPM1-204ENST00000334895 SYNGR2O43760 224 aa16.99■□□□□ 0.31
TPM1-204ENST00000334895 TMEM50AO95807 157 aa16.99■□□□□ 0.31
TPM1-204ENST00000334895 FAM103A1Q9BTL3 118 aaKnown RBP16.99■□□□□ 0.31
TPM1-204ENST00000334895 RNF126Q9BV68 326 aa16.99■□□□□ 0.31
TPM1-204ENST00000334895 OR5AC2Q9NZP5 309 aa16.99■□□□□ 0.31
TPM1-204ENST00000334895 SSSCA1O60232 199 aa16.99■□□□□ 0.31
TPM1-204ENST00000334895 CNIH1O95406 144 aa16.99■□□□□ 0.31
TPM1-204ENST00000334895 EGR2P11161 476 aaPredicted RBP16.99■□□□□ 0.31
TPM1-204ENST00000334895 VDAC2P45880 294 aaPredicted RBP16.99■□□□□ 0.31
TPM1-204ENST00000334895 GRPEL2Q8TAA5 225 aa16.99■□□□□ 0.31
TPM1-204ENST00000334895 ARPC1AQ92747 370 aa16.99■□□□□ 0.31
TPM1-204ENST00000334895 JMJD8Q96S16 334 aa16.99■□□□□ 0.31
TPM1-204ENST00000334895 CEBPZOSA8MTT3 80 aa16.98■□□□□ 0.31
TPM1-204ENST00000334895 PFDN1O60925 122 aa16.98■□□□□ 0.31
TPM1-204ENST00000334895 DEDDO75618 318 aa16.98■□□□□ 0.31
TPM1-204ENST00000334895 IAPPP10997 89 aa16.98■□□□□ 0.31
TPM1-204ENST00000334895 PAX9P55771 341 aa16.98■□□□□ 0.31
TPM1-204ENST00000334895 PRIMA1Q86XR5 153 aa16.98■□□□□ 0.31
TPM1-204ENST00000334895 DTD1Q8TEA8 209 aa16.98■□□□□ 0.31
TPM1-204ENST00000334895 IGLC7A0M8Q6 106 aa16.97■□□□□ 0.31
TPM1-204ENST00000334895 MSGN1A6NI15 193 aa16.97■□□□□ 0.31
TPM1-204ENST00000334895 APELAP0DMC3 54 aa16.97■□□□□ 0.31
TPM1-204ENST00000334895 WT1-ASQ06250 92 aa16.97■□□□□ 0.31
TPM1-204ENST00000334895 C9orf152Q5JTZ5 239 aa16.97■□□□□ 0.31
TPM1-204ENST00000334895 MBD2Q9UBB5 411 aa16.97■□□□□ 0.31
TPM1-204ENST00000334895 CACFD1Q9UGQ2 172 aa16.97■□□□□ 0.31
TPM1-204ENST00000334895 WRBO00258 174 aa16.96■□□□□ 0.31
TPM1-204ENST00000334895 ATP6V0E1O15342 81 aa16.96■□□□□ 0.31
TPM1-204ENST00000334895 MED6O75586 246 aa16.96■□□□□ 0.31
TPM1-204ENST00000334895 IGHG2P01859 326 aa16.96■□□□□ 0.31
TPM1-204ENST00000334895 RNASE1P07998 156 aaKnown RBP16.96■□□□□ 0.31
TPM1-204ENST00000334895 RIPPLY3P57055 190 aa16.96■□□□□ 0.31
TPM1-204ENST00000334895 UBA52P62987 128 aaKnown RBP16.96■□□□□ 0.31
TPM1-204ENST00000334895 ASPHD1Q5U4P2 390 aa16.96■□□□□ 0.31
TPM1-204ENST00000334895 PLEKHA3Q9HB20 300 aa16.96■□□□□ 0.31
TPM1-204ENST00000334895 ZFP57Q9NU63 452 aa16.96■□□□□ 0.31
TPM1-204ENST00000334895 FAM181BA6NEQ2 426 aa16.96■□□□□ 0.3
TPM1-204ENST00000334895 LYL1P12980 280 aa16.96■□□□□ 0.3
TPM1-204ENST00000334895 AREGP15514 252 aa16.96■□□□□ 0.3
TPM1-204ENST00000334895 HOXA1P49639 335 aaPredicted RBP16.96■□□□□ 0.3
TPM1-204ENST00000334895 PRSS54Q6PEW0 395 aa16.96■□□□□ 0.3
TPM1-204ENST00000334895 OR11H4Q8NGC9 324 aa16.96■□□□□ 0.3
TPM1-204ENST00000334895 NPFFR1Q9GZQ6 430 aa16.96■□□□□ 0.3
TPM1-204ENST00000334895 ZNF702PQ9H963 129 aa16.96■□□□□ 0.3
TPM1-204ENST00000334895 PARP11Q9NR21 331 aa16.96■□□□□ 0.3
TPM1-204ENST00000334895 INS-IGF2F8WCM5 200 aa16.95■□□□□ 0.3
TPM1-204ENST00000334895 FGL1Q08830 312 aa16.95■□□□□ 0.3
TPM1-204ENST00000334895 TAF15Q92804 592 aaKnown RBP eCLIP16.95■□□□□ 0.3
TPM1-204ENST00000334895 SGMS2Q8NHU3 365 aa16.94■□□□□ 0.3
TPM1-204ENST00000334895 ABHD5Q8WTS1 349 aa16.94■□□□□ 0.3
TPM1-204ENST00000334895 RAB40CQ96S21 281 aa16.94■□□□□ 0.3
TPM1-204ENST00000334895 A0A1W2PN81 502 aa16.93■□□□□ 0.3
TPM1-204ENST00000334895 TRIM77I1YAP6 450 aa16.93■□□□□ 0.3
TPM1-204ENST00000334895 KCNAB3O43448 404 aa16.93■□□□□ 0.3
TPM1-204ENST00000334895 REG1AP05451 166 aa16.93■□□□□ 0.3
TPM1-204ENST00000334895 PET100P0DJ07 73 aa16.93■□□□□ 0.3
TPM1-204ENST00000334895 SLC25A4P12235 298 aa16.93■□□□□ 0.3
TPM1-204ENST00000334895 CHRNA7P36544 502 aa16.93■□□□□ 0.3
TPM1-204ENST00000334895 TMEM95Q3KNT9 176 aa16.93■□□□□ 0.3
TPM1-204ENST00000334895 SLC35E3Q7Z769 313 aa16.93■□□□□ 0.3
TPM1-204ENST00000334895 LFNGQ8NES3 379 aa16.93■□□□□ 0.3
TPM1-204ENST00000334895 SMIM8Q96KF7 97 aa16.93■□□□□ 0.3
TPM1-204ENST00000334895 HEYLQ9NQ87 328 aaPredicted RBP16.93■□□□□ 0.3
TPM1-204ENST00000334895 H3BP45 60 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 RLN2P04090 185 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 OR13C7P0DN81 318 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 CRIP2P52943 208 aaPredicted RBP16.92■□□□□ 0.3
TPM1-204ENST00000334895 C19orf35Q6ZS72 473 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 OR2C3Q8N628 320 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 THAP6Q8TBB0 222 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 TMEM170AQ8WVE7 144 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 OR4C12Q96R67 309 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 SRSF8Q9BRL6 282 aaKnown RBP16.92■□□□□ 0.3
TPM1-204ENST00000334895 ENY2Q9NPA8 101 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 WSB1Q9Y6I7 421 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 E5RGE8 158 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 TCF21O43680 179 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 C1QBP02746 253 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 IGF1P05019 195 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 SRSF2Q01130 221 aaKnown RBP16.92■□□□□ 0.3
TPM1-204ENST00000334895 BSXQ3C1V8 233 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 C19orf54Q5BKX5 351 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 Q8N2B8 174 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 CIB3Q96Q77 187 aaPredicted RBP16.92■□□□□ 0.3
TPM1-204ENST00000334895 PRSS22Q9GZN4 317 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 HIPK2Q9H2X6 1198 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 PSENENQ9NZ42 101 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 LINC00527Q9UJ94 153 aa16.92■□□□□ 0.3
TPM1-204ENST00000334895 FXYD6-FXYD2A0A087WZ82 144 aa16.91■□□□□ 0.3
TPM1-204ENST00000334895 G3V318 75 aa16.91■□□□□ 0.3
TPM1-204ENST00000334895 L7N2F9 121 aa16.91■□□□□ 0.3
TPM1-204ENST00000334895 PVALBP20472 110 aaPredicted RBP16.91■□□□□ 0.3
TPM1-204ENST00000334895 TAS2R30P59541 319 aa16.91■□□□□ 0.3
TPM1-204ENST00000334895 RPL15P61313 204 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms