RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 OR1L8Q8NGR8 309 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 OR4A16Q8NH70 328 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 FAM110DQ8TAY7 271 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-202ENST00000331450 MYOZ3Q8TDC0 251 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 FYTTD1Q96QD9 318 aaKnown RBP12.54□□□□□ -0.4
LRRC28-202ENST00000331450 PHB2Q99623 299 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 SRSF8Q9BRL6 282 aaKnown RBP12.54□□□□□ -0.4
LRRC28-202ENST00000331450 SEC22CQ9BRL7 303 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 QTRT1Q9BXR0 403 aaKnown RBP12.54□□□□□ -0.4
LRRC28-202ENST00000331450 COA4Q9NYJ1 87 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 CACNG5Q9UF02 275 aa12.54□□□□□ -0.4
LRRC28-202ENST00000331450 INMT-MINDY4F8WBC2 141 aa12.53□□□□□ -0.4
LRRC28-202ENST00000331450 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
LRRC28-202ENST00000331450 BRI3O95415 125 aa12.53□□□□□ -0.4
LRRC28-202ENST00000331450 ELANEP08246 267 aa12.53□□□□□ -0.4
LRRC28-202ENST00000331450 TRAPPC2P0DI81 140 aa12.53□□□□□ -0.4
LRRC28-202ENST00000331450 TRAPPC2BP0DI82 140 aa12.53□□□□□ -0.4
LRRC28-202ENST00000331450 AREGP15514 252 aa12.53□□□□□ -0.4
LRRC28-202ENST00000331450 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
LRRC28-202ENST00000331450 COQ8AQ8NI60 647 aa12.53□□□□□ -0.4
LRRC28-202ENST00000331450 ZNF431Q8TF32 576 aaPredicted RBP12.53□□□□□ -0.4
LRRC28-202ENST00000331450 TMED3Q9Y3Q3 217 aa12.53□□□□□ -0.4
LRRC28-202ENST00000331450 STAB1Q9NY15 2570 aa12.53□□□□□ -0.4
LRRC28-202ENST00000331450 NPIPB5A8MRT5 1133 aa12.52□□□□□ -0.41
LRRC28-202ENST00000331450 ADARB2-AS1A8MUL3 147 aa12.52□□□□□ -0.41
LRRC28-202ENST00000331450 H3BUA1 57 aa12.52□□□□□ -0.41
LRRC28-202ENST00000331450 PRAF2O60831 178 aa12.52□□□□□ -0.41
LRRC28-202ENST00000331450 SULT1A3P0DMM9 295 aa12.52□□□□□ -0.41
LRRC28-202ENST00000331450 SULT1A4P0DMN0 295 aa12.52□□□□□ -0.41
LRRC28-202ENST00000331450 HSPE1P61604 102 aaKnown RBP12.52□□□□□ -0.41
LRRC28-202ENST00000331450 PRCDQ00LT1 54 aa12.52□□□□□ -0.41
LRRC28-202ENST00000331450 PDLIM3Q53GG5 364 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-202ENST00000331450 HIST2H2BDQ6DRA6 164 aa12.52□□□□□ -0.41
LRRC28-202ENST00000331450 TTC9CQ8N5M4 171 aa12.52□□□□□ -0.41
LRRC28-202ENST00000331450 OR10W1Q8NGF6 305 aa12.52□□□□□ -0.41
LRRC28-202ENST00000331450 CITED2Q99967 270 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-202ENST00000331450 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-202ENST00000331450 A0A1B0GU03 582 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 PITX3O75364 302 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 ADAP1O75689 374 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 CRYGCP07315 174 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 SLC25A6P12236 298 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 CTRB1P17538 263 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 WT1-ASQ06250 92 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 SMCO1Q147U7 214 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 KLK9Q2XQG4 91 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 GGNBP1Q5YKI7 109 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 CTRB2Q6GPI1 263 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 LCNL1Q6ZST4 164 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 HSD17B13Q7Z5P4 300 aaPredicted RBP12.51□□□□□ -0.41
LRRC28-202ENST00000331450 OR5T1Q8NG75 326 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 KLK15Q9H2R5 256 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 KLK9Q9UKQ9 250 aa12.51□□□□□ -0.41
LRRC28-202ENST00000331450 INS-IGF2F8WCM5 200 aa12.5□□□□□ -0.41
LRRC28-202ENST00000331450 RBMXL2O75526 392 aaKnown RBP12.5□□□□□ -0.41
LRRC28-202ENST00000331450 RPLP1P05386 114 aaKnown RBP12.5□□□□□ -0.41
LRRC28-202ENST00000331450 HOXB5P09067 269 aa12.5□□□□□ -0.41
LRRC28-202ENST00000331450 PF4V1P10720 104 aa12.5□□□□□ -0.41
LRRC28-202ENST00000331450 PSMB6P28072 239 aa12.5□□□□□ -0.41
LRRC28-202ENST00000331450 KIAA0141Q14154 515 aaPredicted RBP12.5□□□□□ -0.41
LRRC28-202ENST00000331450 RGS21Q2M5E4 152 aa12.5□□□□□ -0.41
LRRC28-202ENST00000331450 CXorf66Q5JRM2 361 aaPredicted RBP12.5□□□□□ -0.41
LRRC28-202ENST00000331450 OR52E5Q8NH55 327 aa12.5□□□□□ -0.41
LRRC28-202ENST00000331450 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
LRRC28-202ENST00000331450 MPTX1A8MV57 137 aa12.49□□□□□ -0.41
LRRC28-202ENST00000331450 SNRPGP15A8MWD9 76 aa12.49□□□□□ -0.41
LRRC28-202ENST00000331450 DHFRP00374 187 aa12.49□□□□□ -0.41
LRRC28-202ENST00000331450 REG1AP05451 166 aa12.49□□□□□ -0.41
LRRC28-202ENST00000331450 RAB9AP51151 201 aa12.49□□□□□ -0.41
LRRC28-202ENST00000331450 SPCS3P61009 180 aa12.49□□□□□ -0.41
LRRC28-202ENST00000331450 RPL23AP62750 156 aaKnown RBP12.49□□□□□ -0.41
LRRC28-202ENST00000331450 C19orf35Q6ZS72 473 aa12.49□□□□□ -0.41
LRRC28-202ENST00000331450 NDUFA11Q86Y39 141 aa12.49□□□□□ -0.41
LRRC28-202ENST00000331450 C12orf45Q8N5I9 185 aaPredicted RBP12.49□□□□□ -0.41
LRRC28-202ENST00000331450 HINT2Q9BX68 163 aa12.49□□□□□ -0.41
LRRC28-202ENST00000331450 GPN1Q9HCN4 374 aaPredicted RBP12.49□□□□□ -0.41
LRRC28-202ENST00000331450 HSPB7Q9UBY9 170 aa12.49□□□□□ -0.41
LRRC28-202ENST00000331450 TSSC4Q9Y5U2 329 aaPredicted RBP12.49□□□□□ -0.41
LRRC28-202ENST00000331450 TRBV9A0A0B4J1U6 114 aa12.48□□□□□ -0.41
LRRC28-202ENST00000331450 TCRBV4S1A1TA0A5B7 111 aa12.48□□□□□ -0.41
LRRC28-202ENST00000331450 C7orf66A4D0T2 115 aa12.48□□□□□ -0.41
LRRC28-202ENST00000331450 OR13C7P0DN81 318 aa12.48□□□□□ -0.41
LRRC28-202ENST00000331450 FANCD2OSQ96PS1 177 aa12.48□□□□□ -0.41
LRRC28-202ENST00000331450 PDCD10Q9BUL8 212 aa12.48□□□□□ -0.41
LRRC28-202ENST00000331450 PLEKHA3Q9HB20 300 aa12.48□□□□□ -0.41
LRRC28-202ENST00000331450 ZFP57Q9NU63 452 aa12.48□□□□□ -0.41
LRRC28-202ENST00000331450 CACFD1Q9UGQ2 172 aa12.48□□□□□ -0.41
LRRC28-202ENST00000331450 IFNA17P01571 189 aa12.47□□□□□ -0.41
LRRC28-202ENST00000331450 PRH1P02810 166 aa12.47□□□□□ -0.41
LRRC28-202ENST00000331450 TRGV3P03979 118 aa12.47□□□□□ -0.41
LRRC28-202ENST00000331450 CDX1P47902 265 aaPredicted RBP12.47□□□□□ -0.41
LRRC28-202ENST00000331450 TPPP2P59282 170 aa12.47□□□□□ -0.41
LRRC28-202ENST00000331450 TNFRSF9Q07011 255 aa12.47□□□□□ -0.41
LRRC28-202ENST00000331450 OXA1LQ15070 435 aa12.47□□□□□ -0.41
LRRC28-202ENST00000331450 SPINK9Q5DT21 86 aa12.47□□□□□ -0.41
LRRC28-202ENST00000331450 TMEM65Q6PI78 240 aa12.47□□□□□ -0.41
LRRC28-202ENST00000331450 OR2C3Q8N628 320 aa12.47□□□□□ -0.41
LRRC28-202ENST00000331450 ZNF491Q8N8L2 437 aa12.47□□□□□ -0.41
LRRC28-202ENST00000331450 ZNF114Q8NC26 417 aa12.47□□□□□ -0.41
LRRC28-202ENST00000331450 OR1S1Q8NH92 325 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms