RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 CLDND2Q8NHS1 167 aa11.97□□□□□ -0.49
FNDC1-202ENST00000329629 LOC105371242A0A075B767 164 aa11.97□□□□□ -0.49
FNDC1-202ENST00000329629 TRBV7-9A0A0J9YWB2 115 aa11.97□□□□□ -0.49
FNDC1-202ENST00000329629 RAMP1O60894 148 aa11.97□□□□□ -0.49
FNDC1-202ENST00000329629 UCP3P55916 312 aa11.97□□□□□ -0.49
FNDC1-202ENST00000329629 TMEM14DPA8MWL7 114 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 TMEM250H0YL14 139 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 TMEM50AO95807 157 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 CA7P43166 264 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 CDCP2Q5VXM1 449 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 TMEM105Q8N8V8 129 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 TMEM186Q96B77 213 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 NPFFR1Q9GZQ6 430 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 KLF4O43474 513 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 PIMREGQ9BSJ6 248 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 CLEC7AQ9BXN2 247 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 RPP21Q9H633 154 aaKnown RBP11.96□□□□□ -0.49
FNDC1-202ENST00000329629 KNL1Q8NG31 2342 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 C4orf51C9J302 202 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 LEPP41159 167 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 RAB9AP51151 201 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 CD69Q07108 199 aa11.96□□□□□ -0.49
FNDC1-202ENST00000329629 ATRAIDQ6UW56 229 aa11.96□□□□□ -0.5
FNDC1-202ENST00000329629 C11orf68Q9H3H3 251 aaKnown RBP11.96□□□□□ -0.5
FNDC1-202ENST00000329629 ZNF729A6NN14 1252 aaPredicted RBP11.96□□□□□ -0.5
FNDC1-202ENST00000329629 NPIPB4C9JG80 1138 aa11.96□□□□□ -0.5
FNDC1-202ENST00000329629 ATP5LO75964 103 aa11.96□□□□□ -0.5
FNDC1-202ENST00000329629 DCTN5Q9BTE1 182 aa11.96□□□□□ -0.5
FNDC1-202ENST00000329629 ADMP35318 185 aa11.95□□□□□ -0.5
FNDC1-202ENST00000329629 FOXA2Q9Y261 457 aaPredicted RBP11.95□□□□□ -0.5
FNDC1-202ENST00000329629 PLXNA1Q9UIW2 1896 aa11.95□□□□□ -0.5
FNDC1-202ENST00000329629 IGKV1D-42A0A075B6H8 117 aa11.95□□□□□ -0.5
FNDC1-202ENST00000329629 NBEAP1P0C6P0 100 aa11.95□□□□□ -0.5
FNDC1-202ENST00000329629 RNASE4P34096 147 aaKnown RBP11.95□□□□□ -0.5
FNDC1-202ENST00000329629 PTGDSP41222 190 aa11.95□□□□□ -0.5
FNDC1-202ENST00000329629 TMEM106BQ9NUM4 274 aa11.95□□□□□ -0.5
FNDC1-202ENST00000329629 GATAD1Q8WUU5 269 aa11.95□□□□□ -0.5
FNDC1-202ENST00000329629 GPX4P36969 197 aaPredicted RBP11.95□□□□□ -0.5
FNDC1-202ENST00000329629 ZNRF1Q8ND25 227 aa11.95□□□□□ -0.5
FNDC1-202ENST00000329629 PGPEP1LA6NFU8 196 aa11.95□□□□□ -0.5
FNDC1-202ENST00000329629 CENPVQ7Z7K6 275 aaPredicted RBP11.95□□□□□ -0.5
FNDC1-202ENST00000329629 FMC1Q96HJ9 113 aa11.95□□□□□ -0.5
FNDC1-202ENST00000329629 SPAG17Q6Q759 2223 aa11.95□□□□□ -0.5
FNDC1-202ENST00000329629 MIA3Q5JRA6 1907 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 MIR17HGQ75NE6 70 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 OR5P3Q8WZ94 311 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 SERF1AO75920 110 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 IFI27L2Q9H2X8 130 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 A0A1B0GUT8 65 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 TBX6O95947 436 aaPredicted RBP11.94□□□□□ -0.5
FNDC1-202ENST00000329629 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
FNDC1-202ENST00000329629 LRTM2Q8N967 370 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 SCARF2Q96GP6 870 aaPredicted RBP11.94□□□□□ -0.5
FNDC1-202ENST00000329629 NUP214P35658 2090 aaPredicted RBP11.94□□□□□ -0.5
FNDC1-202ENST00000329629 IZUMO1RA6ND01 250 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 PROB1E7EW31 1015 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 H3BRM9 83 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 NDUFA2O43678 99 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 DNM1P46Q6ZS02 220 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 LAMTOR2Q9Y2Q5 125 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 IGHV3OR16-8A0A075B7F1 116 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 TRGV3P03979 118 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 CTSBP07858 339 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 C1QL2Q7Z5L3 287 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 ANAPC13Q9BS18 74 aa11.94□□□□□ -0.5
FNDC1-202ENST00000329629 RBMY1BA6NDE4 496 aaKnown RBP11.93□□□□□ -0.5
FNDC1-202ENST00000329629 RBMY1EA6NEQ0 496 aaKnown RBP11.93□□□□□ -0.5
FNDC1-202ENST00000329629 RBMY1DP0C7P1 496 aaKnown RBP11.93□□□□□ -0.5
FNDC1-202ENST00000329629 RBMY1A1P0DJD3 496 aaKnown RBP11.93□□□□□ -0.5
FNDC1-202ENST00000329629 RBMY1CP0DJD4 496 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 SSBP4Q9BWG4 385 aaPredicted RBP11.93□□□□□ -0.5
FNDC1-202ENST00000329629 NHP2Q9NX24 153 aaKnown RBP11.93□□□□□ -0.5
FNDC1-202ENST00000329629 PCOLCEQ15113 449 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 TEX29Q8N6K0 151 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 TMEM54Q969K7 222 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 DUX3Q96PT4 197 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 CNTRLQ7Z7A1 2325 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 ZNF815PA8K554 130 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 IGHMP01871 453 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 CNTFRP26992 372 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 SDF2L1Q9HCN8 221 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 IGHV1-69-2A0A0G2JMI3 117 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 CKS1BP61024 79 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 LINC01590Q5TEZ4 76 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 GFI1BQ5VTD9 330 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 LAIR2Q6ISS4 152 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 NRN1Q9NPD7 142 aa11.93□□□□□ -0.5
FNDC1-202ENST00000329629 H7C1H1 209 aa11.92□□□□□ -0.5
FNDC1-202ENST00000329629 GATA2P23769 480 aaPredicted RBP11.92□□□□□ -0.5
FNDC1-202ENST00000329629 SRSF3P84103 164 aaKnown RBP11.92□□□□□ -0.5
FNDC1-202ENST00000329629 FAM71F2Q6NXP2 309 aa11.92□□□□□ -0.5
FNDC1-202ENST00000329629 C5orf30Q96GV9 206 aa11.92□□□□□ -0.5
FNDC1-202ENST00000329629 RNASE7Q9H1E1 156 aaKnown RBP11.92□□□□□ -0.5
FNDC1-202ENST00000329629 C17orf98A8MV24 154 aa11.92□□□□□ -0.5
FNDC1-202ENST00000329629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.92□□□□□ -0.5
FNDC1-202ENST00000329629 A8MXK9 166 aa11.92□□□□□ -0.5
FNDC1-202ENST00000329629 IFNL4K9M1U5 179 aa11.92□□□□□ -0.5
FNDC1-202ENST00000329629 GNG5P63218 68 aa11.92□□□□□ -0.5
FNDC1-202ENST00000329629 PAX2Q02962 417 aa11.92□□□□□ -0.5
FNDC1-202ENST00000329629 FBLN7Q53RD9 439 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms