RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 C8orf46Q8TAG6 207 aa12.82□□□□□ -0.36
PGBD2-201ENST00000329291 GATAD1Q8WUU5 269 aa12.82□□□□□ -0.36
PGBD2-201ENST00000329291 RAB24Q969Q5 203 aa12.82□□□□□ -0.36
PGBD2-201ENST00000329291 PLEKHA3Q9HB20 300 aa12.82□□□□□ -0.36
PGBD2-201ENST00000329291 RPS10P5Q9NQ39 176 aa12.82□□□□□ -0.36
PGBD2-201ENST00000329291 TPSG1Q9NRR2 321 aa12.82□□□□□ -0.36
PGBD2-201ENST00000329291 WASHC3Q9Y3C0 194 aa12.82□□□□□ -0.36
PGBD2-201ENST00000329291 SVEP1Q4LDE5 3571 aa12.81□□□□□ -0.36
PGBD2-201ENST00000329291 SPTAN1Q13813 2472 aaKnown RBP12.81□□□□□ -0.36
PGBD2-201ENST00000329291 CGB1A6NKQ9 187 aa12.81□□□□□ -0.36
PGBD2-201ENST00000329291 BCL2P10415 239 aa12.81□□□□□ -0.36
PGBD2-201ENST00000329291 COX7A1P24310 79 aa12.81□□□□□ -0.36
PGBD2-201ENST00000329291 HLA-DRB5Q30154 266 aa12.81□□□□□ -0.36
PGBD2-201ENST00000329291 C10orf55Q5SWW7 151 aa12.81□□□□□ -0.36
PGBD2-201ENST00000329291 NDUFA4L2Q9NRX3 87 aa12.81□□□□□ -0.36
PGBD2-201ENST00000329291 LSM4Q9Y4Z0 139 aaKnown RBP12.81□□□□□ -0.36
PGBD2-201ENST00000329291 CTXND1A0A1B0GTU2 59 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 C17orf112F2Z3M2 114 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 BUB1B-PAK6H3BSN5 160 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 ENSAO43768 121 aaKnown RBP12.8□□□□□ -0.36
PGBD2-201ENST00000329291 RPL8P62917 257 aaKnown RBP12.8□□□□□ -0.36
PGBD2-201ENST00000329291 LDLRAD2Q5SZI1 272 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 MIC13Q5XKP0 118 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 TMEM167AQ8TBQ9 72 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 GGTLC1Q9BX51 225 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 ZNF430Q9H8G1 570 aaPredicted RBP12.8□□□□□ -0.36
PGBD2-201ENST00000329291 ONECUT1Q9UBC0 465 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 MBP02144 154 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 CNTFRP26992 372 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 OR5B3Q8NH48 314 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 SSMEM1Q8WWF3 244 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 PCGF1Q9BSM1 259 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 CLEC7AQ9BXN2 247 aa12.8□□□□□ -0.36
PGBD2-201ENST00000329291 ACTR3CQ9C0K3 210 aaPredicted RBP12.8□□□□□ -0.36
PGBD2-201ENST00000329291 PATZ1Q9HBE1 687 aaKnown RBP12.8□□□□□ -0.36
PGBD2-201ENST00000329291 H3BQ15 152 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 SLC25A17O43808 307 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 RNASE2P10153 161 aaKnown RBP12.79□□□□□ -0.36
PGBD2-201ENST00000329291 ARF6P62330 175 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 BSXQ3C1V8 233 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 OR4P4Q8NGL7 312 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 IGFBPL1Q8WX77 278 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 NPVFQ9HCQ7 196 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 FKBP11Q9NYL4 201 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 AKAP6Q13023 2319 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 COLCA2A8K830 154 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 IL3RAP26951 378 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 PRRX1P54821 245 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 FAM90A2PQ658T7 463 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 PNKDQ8N490 385 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 COMMD5Q9GZQ3 224 aa12.79□□□□□ -0.36
PGBD2-201ENST00000329291 hCG_1809904A0A1W2PP81 198 aa12.78□□□□□ -0.36
PGBD2-201ENST00000329291 A0A1W2PPE2 198 aa12.78□□□□□ -0.36
PGBD2-201ENST00000329291 A0A1W2PR64 198 aa12.78□□□□□ -0.36
PGBD2-201ENST00000329291 A0A1W2PRV1 198 aa12.78□□□□□ -0.36
PGBD2-201ENST00000329291 PLXNB1O43157 2135 aa12.78□□□□□ -0.36
PGBD2-201ENST00000329291 GOSR1O95249 250 aa12.78□□□□□ -0.36
PGBD2-201ENST00000329291 RBP4P02753 201 aa12.78□□□□□ -0.36
PGBD2-201ENST00000329291 USF1P22415 310 aaPredicted RBP12.78□□□□□ -0.36
PGBD2-201ENST00000329291 MC5RP33032 325 aa12.78□□□□□ -0.36
PGBD2-201ENST00000329291 OPRK1P41145 380 aa12.78□□□□□ -0.36
PGBD2-201ENST00000329291 ACOT6Q3I5F7 207 aaPredicted RBP12.78□□□□□ -0.36
PGBD2-201ENST00000329291 TNFRSF14Q92956 283 aa12.78□□□□□ -0.36
PGBD2-201ENST00000329291 PXMP4Q9Y6I8 212 aa12.78□□□□□ -0.36
PGBD2-201ENST00000329291 IGHV1-3A0A0C4DH29 117 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 LY6LH3BQJ8 138 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 CYB5BO43169 146 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 MPDU1O75352 247 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 PRB1P04280 392 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 LIPFP07098 398 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 GPR6P46095 362 aaPredicted RBP12.77□□□□□ -0.36
PGBD2-201ENST00000329291 CD81P60033 236 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 WT1-ASQ06250 92 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 PMS2P11Q13670 270 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 C2orf83Q53S99 150 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 BEND2Q8NDZ0 799 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 OR1L8Q8NGR8 309 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 ISOC2Q96AB3 205 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 SMCO4Q9NRQ5 59 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 VAX2Q9UIW0 290 aa12.77□□□□□ -0.36
PGBD2-201ENST00000329291 IGKV1OR2-108A0A075B7D4 117 aa12.77□□□□□ -0.37
PGBD2-201ENST00000329291 SEC14L6B5MCN3 397 aa12.77□□□□□ -0.37
PGBD2-201ENST00000329291 RAB13P51153 203 aa12.77□□□□□ -0.37
PGBD2-201ENST00000329291 EFNA4P52798 201 aa12.77□□□□□ -0.37
PGBD2-201ENST00000329291 C17orf50Q8WW18 174 aa12.77□□□□□ -0.37
PGBD2-201ENST00000329291 SIRT7Q9NRC8 400 aa12.77□□□□□ -0.37
PGBD2-201ENST00000329291 INSIG2Q9Y5U4 225 aa12.77□□□□□ -0.37
PGBD2-201ENST00000329291 VPS13CQ709C8 3753 aa12.76□□□□□ -0.37
PGBD2-201ENST00000329291 PAX6P26367 422 aa12.76□□□□□ -0.37
PGBD2-201ENST00000329291 CDC34P49427 236 aaPredicted RBP12.76□□□□□ -0.37
PGBD2-201ENST00000329291 TEPPQ6URK8 271 aa12.76□□□□□ -0.37
PGBD2-201ENST00000329291 OR4A5Q8NH83 315 aa12.76□□□□□ -0.37
PGBD2-201ENST00000329291 LOC105371242A0A075B767 164 aa12.76□□□□□ -0.37
PGBD2-201ENST00000329291 GAMTQ14353 236 aa12.76□□□□□ -0.37
PGBD2-201ENST00000329291 VSTM2AQ8TAG5 236 aa12.76□□□□□ -0.37
PGBD2-201ENST00000329291 BBC3Q96PG8 261 aaPredicted RBP12.76□□□□□ -0.37
PGBD2-201ENST00000329291 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
PGBD2-201ENST00000329291 MED13LQ71F56 2210 aa12.76□□□□□ -0.37
PGBD2-201ENST00000329291 UTP20O75691 2785 aaKnown RBP12.76□□□□□ -0.37
PGBD2-201ENST00000329291 USP24Q9UPU5 2620 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms