RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TERB2Q8NHR7 220 aa21.12■□□□□ 0.97
ATPAF1-201ENST00000329231 ZNF486Q96H40 463 aaPredicted RBP21.12■□□□□ 0.97
ATPAF1-201ENST00000329231 SORL1Q92673 2214 aa21.12■□□□□ 0.97
ATPAF1-201ENST00000329231 IGLC7A0M8Q6 106 aa21.11■□□□□ 0.97
ATPAF1-201ENST00000329231 BMPR1BO00238 502 aa21.11■□□□□ 0.97
ATPAF1-201ENST00000329231 TRAPPC2P0DI81 140 aa21.11■□□□□ 0.97
ATPAF1-201ENST00000329231 TRAPPC2BP0DI82 140 aa21.11■□□□□ 0.97
ATPAF1-201ENST00000329231 PTBP1P26599 531 aaKnown RBP eCLIP21.11■□□□□ 0.97
ATPAF1-201ENST00000329231 HSD17B13Q7Z5P4 300 aaPredicted RBP21.11■□□□□ 0.97
ATPAF1-201ENST00000329231 THAP7Q9BT49 309 aaPredicted RBP21.11■□□□□ 0.97
ATPAF1-201ENST00000329231 TEX50A0A1B0GTY4 177 aa21.1■□□□□ 0.97
ATPAF1-201ENST00000329231 ANKRD20A5PA0PJZ0 165 aa21.1■□□□□ 0.97
ATPAF1-201ENST00000329231 DISC1C4P0D8 188 aa21.1■□□□□ 0.97
ATPAF1-201ENST00000329231 NDUFB8O95169 186 aa21.1■□□□□ 0.97
ATPAF1-201ENST00000329231 IGLV1-51P01701 117 aa21.1■□□□□ 0.97
ATPAF1-201ENST00000329231 RND3P61587 244 aa21.1■□□□□ 0.97
ATPAF1-201ENST00000329231 SCGB2B2Q4G0G5 96 aa21.1■□□□□ 0.97
ATPAF1-201ENST00000329231 PYDC2Q56P42 97 aa21.1■□□□□ 0.97
ATPAF1-201ENST00000329231 TSC22D3Q99576 134 aa21.1■□□□□ 0.97
ATPAF1-201ENST00000329231 PRNDQ9UKY0 176 aa21.1■□□□□ 0.97
ATPAF1-201ENST00000329231 IGLV11-55A0A075B6I3 123 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 GP9P14770 177 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 ETV6P41212 452 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 PPP5CP53041 499 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 SPANXN2Q5MJ10 180 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 FAAP20Q6NZ36 180 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 IL34Q6ZMJ4 242 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 OR4C16Q8NGL9 310 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 EEF1AKMT3Q96AZ1 226 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 FKBP11Q9NYL4 201 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 PEMTQ9UBM1 199 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 NSG2Q9Y328 171 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 OR51B2Q9Y5P1 312 aa21.09■□□□□ 0.97
ATPAF1-201ENST00000329231 CYB5BO43169 146 aa21.08■□□□□ 0.97
ATPAF1-201ENST00000329231 SERPINE2P07093 398 aa21.08■□□□□ 0.97
ATPAF1-201ENST00000329231 ZNF79Q15937 498 aa21.08■□□□□ 0.97
ATPAF1-201ENST00000329231 OR10W1Q8NGF6 305 aa21.08■□□□□ 0.97
ATPAF1-201ENST00000329231 ZFAND1Q8TCF1 268 aa21.08■□□□□ 0.97
ATPAF1-201ENST00000329231 NDUFA4L2Q9NRX3 87 aa21.08■□□□□ 0.97
ATPAF1-201ENST00000329231 THYN1Q9P016 225 aa21.08■□□□□ 0.97
ATPAF1-201ENST00000329231 SMAD5-AS1Q9Y6J3 95 aa21.08■□□□□ 0.97
ATPAF1-201ENST00000329231 GGCTO75223 188 aaKnown RBP21.07■□□□□ 0.96
ATPAF1-201ENST00000329231 PIGPP57054 158 aa21.07■□□□□ 0.96
ATPAF1-201ENST00000329231 HAPLN4Q86UW8 402 aa21.07■□□□□ 0.96
ATPAF1-201ENST00000329231 Q8N402 240 aa21.07■□□□□ 0.96
ATPAF1-201ENST00000329231 OR5B3Q8NH48 314 aa21.07■□□□□ 0.96
ATPAF1-201ENST00000329231 SEC22AQ96IW7 307 aa21.07■□□□□ 0.96
ATPAF1-201ENST00000329231 CXorf58Q96LI9 332 aa21.07■□□□□ 0.96
ATPAF1-201ENST00000329231 HINT2Q9BX68 163 aa21.07■□□□□ 0.96
ATPAF1-201ENST00000329231 SIGLEC8Q9NYZ4 499 aa21.07■□□□□ 0.96
ATPAF1-201ENST00000329231 PPP5D1E7EU14 171 aa21.06■□□□□ 0.96
ATPAF1-201ENST00000329231 CSN3P07498 182 aa21.06■□□□□ 0.96
ATPAF1-201ENST00000329231 OR13C7P0DN81 318 aa21.06■□□□□ 0.96
ATPAF1-201ENST00000329231 PI3P19957 117 aa21.06■□□□□ 0.96
ATPAF1-201ENST00000329231 H2BFWTQ7Z2G1 175 aa21.06■□□□□ 0.96
ATPAF1-201ENST00000329231 GDPD1Q8N9F7 314 aa21.06■□□□□ 0.96
ATPAF1-201ENST00000329231 LSM10Q969L4 123 aaKnown RBP21.06■□□□□ 0.96
ATPAF1-201ENST00000329231 CCDC140Q96MF4 163 aa21.06■□□□□ 0.96
ATPAF1-201ENST00000329231 PRRT1Q99946 306 aa21.06■□□□□ 0.96
ATPAF1-201ENST00000329231 TRBV7-1A0A0A6YYK4 115 aa21.05■□□□□ 0.96
ATPAF1-201ENST00000329231 IGHV3-23P01764 117 aa21.05■□□□□ 0.96
ATPAF1-201ENST00000329231 CLEC19AQ6UXS0 136 aa21.05■□□□□ 0.96
ATPAF1-201ENST00000329231 OR13C8Q8NGS7 320 aa21.05■□□□□ 0.96
ATPAF1-201ENST00000329231 MARCH1Q8TCQ1 289 aa21.05■□□□□ 0.96
ATPAF1-201ENST00000329231 TRIM63Q969Q1 353 aa21.05■□□□□ 0.96
ATPAF1-201ENST00000329231 MRGPRFQ96AM1 343 aa21.05■□□□□ 0.96
ATPAF1-201ENST00000329231 TMEM14BQ9NUH8 114 aa21.05■□□□□ 0.96
ATPAF1-201ENST00000329231 DMRT1Q9Y5R6 373 aa21.05■□□□□ 0.96
ATPAF1-201ENST00000329231 S4R3C0 116 aa21.05■□□□□ 0.96
ATPAF1-201ENST00000329231 C15orf61A6NNL5 157 aa21.04■□□□□ 0.96
ATPAF1-201ENST00000329231 H0Y980 276 aa21.04■□□□□ 0.96
ATPAF1-201ENST00000329231 IGKV1-39P01597 117 aa21.04■□□□□ 0.96
ATPAF1-201ENST00000329231 IGKV1D-39P04432 117 aa21.04■□□□□ 0.96
ATPAF1-201ENST00000329231 ARL3P36405 182 aa21.04■□□□□ 0.96
ATPAF1-201ENST00000329231 WT1-ASQ06250 92 aa21.04■□□□□ 0.96
ATPAF1-201ENST00000329231 SURF2Q15527 256 aaPredicted RBP21.04■□□□□ 0.96
ATPAF1-201ENST00000329231 CCDC71LQ8N9Z2 235 aa21.04■□□□□ 0.96
ATPAF1-201ENST00000329231 TMEM56Q96MV1 263 aa21.04■□□□□ 0.96
ATPAF1-201ENST00000329231 SLC2A8Q9NY64 477 aa21.04■□□□□ 0.96
ATPAF1-201ENST00000329231 COPZ2Q9P299 210 aa21.04■□□□□ 0.96
ATPAF1-201ENST00000329231 CTSDP07339 412 aaPredicted RBP21.03■□□□□ 0.96
ATPAF1-201ENST00000329231 NHLRC4P0CG21 123 aaPredicted RBP21.03■□□□□ 0.96
ATPAF1-201ENST00000329231 AP3S2P59780 193 aa21.03■□□□□ 0.96
ATPAF1-201ENST00000329231 OR51S1Q8NGJ8 323 aa21.03■□□□□ 0.96
ATPAF1-201ENST00000329231 OR4A16Q8NH70 328 aa21.03■□□□□ 0.96
ATPAF1-201ENST00000329231 MFSD2BA6NFX1 497 aa21.02■□□□□ 0.96
ATPAF1-201ENST00000329231 OR2C1O95371 312 aa21.02■□□□□ 0.96
ATPAF1-201ENST00000329231 HLA-AP01891 365 aaKnown RBP21.02■□□□□ 0.96
ATPAF1-201ENST00000329231 KLF9Q13886 244 aaPredicted RBP21.02■□□□□ 0.96
ATPAF1-201ENST00000329231 TOMM5Q8N4H5 51 aa21.02■□□□□ 0.96
ATPAF1-201ENST00000329231 SRRQ9GZT4 340 aa21.02■□□□□ 0.96
ATPAF1-201ENST00000329231 SCP2D1Q9UJQ7 156 aa21.02■□□□□ 0.96
ATPAF1-201ENST00000329231 C3orf85A0A1B0GTC6 90 aa21.01■□□□□ 0.95
ATPAF1-201ENST00000329231 MECP2P51608 486 aaKnown RBP21.01■□□□□ 0.95
ATPAF1-201ENST00000329231 C11orf87Q6NUJ2 197 aa21.01■□□□□ 0.95
ATPAF1-201ENST00000329231 SLC25A24Q6NUK1 477 aa21.01■□□□□ 0.95
ATPAF1-201ENST00000329231 GPHB5Q86YW7 130 aa21.01■□□□□ 0.95
ATPAF1-201ENST00000329231 TP53RKQ96S44 253 aa21.01■□□□□ 0.95
ATPAF1-201ENST00000329231 MCUBQ9NWR8 336 aa21.01■□□□□ 0.95
ATPAF1-201ENST00000329231 C14orf166Q9Y224 244 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms