RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 KIAA1217Q5T5P2 1943 aa11.22□□□□□ -0.61
TRAK1-201ENST00000327628 FER1L6-AS1Q8NA97 138 aa11.22□□□□□ -0.61
TRAK1-201ENST00000327628 MIA3Q5JRA6 1907 aa11.22□□□□□ -0.61
TRAK1-201ENST00000327628 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
TRAK1-201ENST00000327628 C15orf61A6NNL5 157 aa11.22□□□□□ -0.61
TRAK1-201ENST00000327628 AURKAIP1Q9NWT8 199 aaPredicted RBP11.22□□□□□ -0.61
TRAK1-201ENST00000327628 H2BFSP57053 126 aa11.22□□□□□ -0.61
TRAK1-201ENST00000327628 IFITM3Q01628 133 aa11.22□□□□□ -0.61
TRAK1-201ENST00000327628 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.61
TRAK1-201ENST00000327628 FABP5P3A8MUU1 101 aa11.21□□□□□ -0.61
TRAK1-201ENST00000327628 IGHV1-2P23083 117 aa11.21□□□□□ -0.61
TRAK1-201ENST00000327628 SCGB3A1Q96QR1 104 aa11.21□□□□□ -0.61
TRAK1-201ENST00000327628 TMEM133Q9H2Q1 129 aa11.21□□□□□ -0.61
TRAK1-201ENST00000327628 TUBGCP6Q96RT7 1819 aa11.21□□□□□ -0.61
TRAK1-201ENST00000327628 TGIF2-C20orf24A0A0A6YYL0 155 aa11.21□□□□□ -0.61
TRAK1-201ENST00000327628 KLK2P20151 261 aa11.21□□□□□ -0.61
TRAK1-201ENST00000327628 CNTFRP26992 372 aa11.21□□□□□ -0.61
TRAK1-201ENST00000327628 MRPL13Q9BYD1 178 aaKnown RBP11.21□□□□□ -0.61
TRAK1-201ENST00000327628 MAP1BP46821 2468 aaKnown RBP11.21□□□□□ -0.62
TRAK1-201ENST00000327628 IGKV3D-15A0A087WSY6 115 aa11.21□□□□□ -0.62
TRAK1-201ENST00000327628 C7orf71A4D174 169 aa11.21□□□□□ -0.62
TRAK1-201ENST00000327628 TIMP3P35625 211 aa11.21□□□□□ -0.62
TRAK1-201ENST00000327628 MINOS1Q5TGZ0 78 aa11.21□□□□□ -0.62
TRAK1-201ENST00000327628 WDR82Q6UXN9 313 aa11.21□□□□□ -0.62
TRAK1-201ENST00000327628 NXT2Q9NPJ8 142 aaKnown RBP11.21□□□□□ -0.62
TRAK1-201ENST00000327628 ZNF257Q9Y2Q1 563 aa11.21□□□□□ -0.62
TRAK1-201ENST00000327628 MINOS1-NBL1R4GNA1 71 aa11.21□□□□□ -0.62
TRAK1-201ENST00000327628 F2Z2F3 143 aa11.21□□□□□ -0.62
TRAK1-201ENST00000327628 PLAURQ03405 335 aa11.21□□□□□ -0.62
TRAK1-201ENST00000327628 ATP5L2Q7Z4Y8 100 aa11.21□□□□□ -0.62
TRAK1-201ENST00000327628 TMEM167AQ8TBQ9 72 aa11.21□□□□□ -0.62
TRAK1-201ENST00000327628 SDHCQ99643 169 aaPredicted RBP11.21□□□□□ -0.62
TRAK1-201ENST00000327628 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
TRAK1-201ENST00000327628 SPINK2P20155 84 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 LHX2P50458 406 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 ORMDL2Q53FV1 153 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 SIGLEC12Q96PQ1 595 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 OSTCQ9NRP0 149 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 EPOPA6NHQ4 379 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 RRHO14718 337 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 NAT1P18440 290 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 C18orf12Q96KH6 178 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 ADAMTSL1Q8N6G6 1762 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 TRAV24A0A0B4J272 114 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 THBDP07204 575 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 EFNB1P98172 346 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 MESP2Q0VG99 397 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 SMPXQ9UHP9 88 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 WDR90Q96KV7 1748 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 DPRXA6NFQ7 191 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 CCL20P78556 96 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 RPL39P5Q59GN2 51 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 LINC01560Q8TB33 94 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 FBXL15Q9H469 300 aa11.2□□□□□ -0.62
TRAK1-201ENST00000327628 TMEM262E9PQX1 116 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 TCF21O43680 179 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 FAM74A4Q5TZK3 123 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 ZNF497Q6ZNH5 498 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 A0A0G2JK05 382 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 SLC25A20O43772 301 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 OR13A1Q8NGR1 328 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 EAF1Q96JC9 268 aaPredicted RBP11.19□□□□□ -0.62
TRAK1-201ENST00000327628 C7orf69Q9H7B7 122 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 ZNFX1Q9P2E3 1918 aaKnown RBP11.19□□□□□ -0.62
TRAK1-201ENST00000327628 ZNF525Q8N782 197 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 PARD6GQ9BYG4 376 aaPredicted RBP11.19□□□□□ -0.62
TRAK1-201ENST00000327628 ZNF638Q14966 1978 aaKnown RBP11.19□□□□□ -0.62
TRAK1-201ENST00000327628 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 ZFP36L1Q07352 338 aaKnown RBP11.19□□□□□ -0.62
TRAK1-201ENST00000327628 PSG7Q13046 419 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 FAM71F2Q6NXP2 309 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 NEU1Q99519 415 aa11.19□□□□□ -0.62
TRAK1-201ENST00000327628 MRPL20Q9BYC9 149 aaKnown RBP11.19□□□□□ -0.62
TRAK1-201ENST00000327628 FOXA2Q9Y261 457 aaPredicted RBP11.19□□□□□ -0.62
TRAK1-201ENST00000327628 ARID1BQ8NFD5 2236 aaPredicted RBP11.19□□□□□ -0.62
TRAK1-201ENST00000327628 TCRBV4S1A1TA0A5B7 111 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
TRAK1-201ENST00000327628 PRCDQ00LT1 54 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 ZNRF1Q8ND25 227 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 Q9H3A6 140 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 CGB1A6NKQ9 187 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 C1QL1O75973 258 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 REG1AP05451 166 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 FAM89BQ8N5H3 189 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 BEND2Q8NDZ0 799 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 ST20Q9HBF5 79 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 IFI27P40305 119 aaPredicted RBP11.18□□□□□ -0.62
TRAK1-201ENST00000327628 RASL11AQ6T310 242 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 NRXN2Q9P2S2 1712 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 PARP14Q460N5 1801 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 TMEM170BQ5T4T1 132 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 KIR3DL3Q8N743 410 aa11.18□□□□□ -0.62
TRAK1-201ENST00000327628 A0A1B0GTI1 187 aa11.17□□□□□ -0.62
TRAK1-201ENST00000327628 TIAF1O95411 115 aa11.17□□□□□ -0.62
TRAK1-201ENST00000327628 IGFBP2P18065 325 aa11.17□□□□□ -0.62
TRAK1-201ENST00000327628 SPSB3Q6PJ21 355 aa11.17□□□□□ -0.62
TRAK1-201ENST00000327628 LINC01587Q99440 93 aa11.17□□□□□ -0.62
TRAK1-201ENST00000327628 WNT10AQ9GZT5 417 aa11.17□□□□□ -0.62
TRAK1-201ENST00000327628 OR9G9P0C7N8 305 aa11.17□□□□□ -0.62
TRAK1-201ENST00000327628 RFPL3SP0C7P2 107 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms