RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 IGFBP2P18065 325 aa12.07□□□□□ -0.48
SSBP3-201ENST00000326956 MZT1Q08AG7 82 aa12.07□□□□□ -0.48
SSBP3-201ENST00000326956 MIR17HGQ75NE6 70 aa12.07□□□□□ -0.48
SSBP3-201ENST00000326956 TXN2Q99757 166 aa12.07□□□□□ -0.48
SSBP3-201ENST00000326956 CA2P00918 260 aa12.06□□□□□ -0.48
SSBP3-201ENST00000326956 HSPE1P61604 102 aaKnown RBP12.06□□□□□ -0.48
SSBP3-201ENST00000326956 FXYD3Q14802 87 aa12.06□□□□□ -0.48
SSBP3-201ENST00000326956 STARD4Q96DR4 205 aa12.06□□□□□ -0.48
SSBP3-201ENST00000326956 FER1L6-AS2Q96M78 137 aa12.06□□□□□ -0.48
SSBP3-201ENST00000326956 CDX2Q99626 313 aaPredicted RBP12.06□□□□□ -0.48
SSBP3-201ENST00000326956 NRN1Q9NPD7 142 aa12.06□□□□□ -0.48
SSBP3-201ENST00000326956 PRR14LQ5THK1 2151 aa12.06□□□□□ -0.48
SSBP3-201ENST00000326956 C15orf61A6NNL5 157 aa12.06□□□□□ -0.48
SSBP3-201ENST00000326956 CRYABP02511 175 aaKnown RBP12.06□□□□□ -0.48
SSBP3-201ENST00000326956 SPATA45Q537H7 98 aa12.06□□□□□ -0.48
SSBP3-201ENST00000326956 RNASE7Q9H1E1 156 aaKnown RBP12.06□□□□□ -0.48
SSBP3-201ENST00000326956 CBY1Q9Y3M2 126 aa12.06□□□□□ -0.48
SSBP3-201ENST00000326956 A6NJY4 79 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 WISP2O76076 250 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 OR5G3P0C626 314 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 AREGP15514 252 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 MRPL54Q6P161 138 aaKnown RBP12.05□□□□□ -0.48
SSBP3-201ENST00000326956 UBALD2Q8IYN6 164 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 MDS2Q8NDY4 140 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 OR2Z1Q8NG97 314 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 FAM216AQ8WUB2 273 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 TRIB1Q96RU8 372 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 TECRQ9NZ01 308 aaKnown RBP12.05□□□□□ -0.48
SSBP3-201ENST00000326956 FRYLO94915 3013 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 MGST3O14880 152 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 CX3CL1P78423 397 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 OR10J3Q5JRS4 329 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 PEAR1Q5VY43 1037 aaPredicted RBP12.05□□□□□ -0.48
SSBP3-201ENST00000326956 Q6ZT83 130 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 NABP2Q9BQ15 211 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 SFXN3Q9BWM7 321 aa12.05□□□□□ -0.48
SSBP3-201ENST00000326956 LINC00614P0C842 121 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 NTF3P20783 257 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 SRIP30626 198 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 TAS2R45P59539 299 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 FAM214BQ7L5A3 538 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 BORCS7Q96B45 105 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 KCNS1Q96KK3 526 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 HEATR1Q9H583 2144 aaKnown RBP12.04□□□□□ -0.48
SSBP3-201ENST00000326956 ZDBF2Q9HCK1 2354 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 TFPI2P48307 235 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 RAB7AP51149 207 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 OR4A47Q6IF82 309 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 C1orf174Q8IYL3 243 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 TMEM178AQ8NBL3 297 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 SPRY4Q9C004 299 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 ZNF331Q9NQX6 463 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-201ENST00000326956 OSTCQ9NRP0 149 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 SLC35D1Q9NTN3 355 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 SLC25A10Q9UBX3 287 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-201ENST00000326956 UQCR10Q9UDW1 63 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 HLA-DQA1P01909 254 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 LEAP2Q969E1 77 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 IFI27L2Q9H2X8 130 aa12.04□□□□□ -0.48
SSBP3-201ENST00000326956 HNRNPA3P51991 378 aaKnown RBP12.03□□□□□ -0.48
SSBP3-201ENST00000326956 RNFT1Q5M7Z0 435 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 IBA57Q5T440 356 aaKnown RBP12.03□□□□□ -0.48
SSBP3-201ENST00000326956 Q6ZN92 141 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 C11orf42Q8N5U0 333 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 C1orf159Q96HA4 380 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 ARL2-SNX15V9GYD0 113 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 TRIOBPQ9H2D6 2365 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 TET2Q6N021 2002 aaPredicted RBP12.03□□□□□ -0.48
SSBP3-201ENST00000326956 IGHV3OR15-7A0A075B7D8 119 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 AMY1AP04745 511 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 ZNF134P52741 427 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 DMRTA1Q5VZB9 504 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 RAB9BQ9NP90 201 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 TUBG2Q9NRH3 451 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 CALYQ9NYX4 217 aa12.03□□□□□ -0.48
SSBP3-201ENST00000326956 FREM2Q5SZK8 3169 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 OR10J4P0C629 311 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 COL8A2P25067 703 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 PRR20EP86478 221 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 PRR20CP86479 221 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 PRR20DP86480 221 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 PRR20BP86481 221 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 PRR20AP86496 221 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 MMDQ15546 238 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 TMEM136Q6ZRR5 245 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 KLHDC1Q8N7A1 406 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 ZNRF1Q8ND25 227 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 FOXA2Q9Y261 457 aaPredicted RBP12.02□□□□□ -0.48
SSBP3-201ENST00000326956 OR51B2Q9Y5P1 312 aa12.02□□□□□ -0.48
SSBP3-201ENST00000326956 A0A1W2PS18 150 aa12.02□□□□□ -0.49
SSBP3-201ENST00000326956 SIAH2O43255 324 aa12.02□□□□□ -0.49
SSBP3-201ENST00000326956 ZNF324O75467 553 aaPredicted RBP12.02□□□□□ -0.49
SSBP3-201ENST00000326956 IGKV3-15P01624 115 aa12.02□□□□□ -0.49
SSBP3-201ENST00000326956 CECR9P0C854 216 aa12.02□□□□□ -0.49
SSBP3-201ENST00000326956 CHRNB4P30926 498 aa12.02□□□□□ -0.49
SSBP3-201ENST00000326956 COMPP49747 757 aaPredicted RBP12.02□□□□□ -0.49
SSBP3-201ENST00000326956 LYG1Q8N1E2 194 aa12.02□□□□□ -0.49
SSBP3-201ENST00000326956 SLC35E1Q96K37 410 aa12.02□□□□□ -0.49
SSBP3-201ENST00000326956 VPS13AQ96RL7 3174 aa12.02□□□□□ -0.49
SSBP3-201ENST00000326956 IGKV1D-17A0A075B6S4 117 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms