RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ZNF414Q96IQ9 312 aa9.23□□□□□ -0.93
TPM3-204ENST00000323144 ZNF2Q9BSG1 426 aaPredicted RBP9.23□□□□□ -0.93
TPM3-204ENST00000323144 COMMD5Q9GZQ3 224 aa9.23□□□□□ -0.93
TPM3-204ENST00000323144 PLEKHA2Q9HB19 425 aa9.23□□□□□ -0.93
TPM3-204ENST00000323144 DIABLOQ9NR28 239 aa9.23□□□□□ -0.93
TPM3-204ENST00000323144 TRBV7-1A0A0A6YYK4 115 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 OR2T8A6NH00 312 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 DBX1A6NMT0 343 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 F8W735 103 aaPredicted RBP9.22□□□□□ -0.93
TPM3-204ENST00000323144 CLEC3BP05452 202 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 G6PCP35575 357 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 SLC16A13Q7RTY0 426 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 GIMAP1Q8WWP7 306 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 FCAMRQ8WWV6 532 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 YIPF6Q96EC8 236 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 CXorf58Q96LI9 332 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 GGTLC1Q9BX51 225 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 HINT2Q9BX68 163 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 UBQLN2Q9UHD9 624 aa9.22□□□□□ -0.93
TPM3-204ENST00000323144 ZNF207O43670 478 aaKnown RBP9.21□□□□□ -0.94
TPM3-204ENST00000323144 OR13C7P0DN81 318 aa9.21□□□□□ -0.94
TPM3-204ENST00000323144 HRH1P35367 487 aa9.21□□□□□ -0.94
TPM3-204ENST00000323144 RPS19P39019 145 aaKnown RBP9.21□□□□□ -0.94
TPM3-204ENST00000323144 ERVK-16P61578 105 aa9.21□□□□□ -0.94
TPM3-204ENST00000323144 FAM106AQ4KMX7 169 aa9.21□□□□□ -0.94
TPM3-204ENST00000323144 ZNF585BQ52M93 769 aa9.21□□□□□ -0.94
TPM3-204ENST00000323144 PHLDA2Q53GA4 152 aa9.21□□□□□ -0.94
TPM3-204ENST00000323144 PLET1Q6UQ28 207 aa9.21□□□□□ -0.94
TPM3-204ENST00000323144 OR5H2Q8NGV7 314 aa9.21□□□□□ -0.94
TPM3-204ENST00000323144 SRSF8Q9BRL6 282 aaKnown RBP9.21□□□□□ -0.94
TPM3-204ENST00000323144 CHRDL1Q9BU40 450 aa9.21□□□□□ -0.94
TPM3-204ENST00000323144 ZNF436Q9C0F3 470 aaPredicted RBP9.21□□□□□ -0.94
TPM3-204ENST00000323144 TEX50A0A1B0GTY4 177 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 K7EIM0 57 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 PGLYRP1O75594 196 aaPredicted RBP9.2□□□□□ -0.94
TPM3-204ENST00000323144 KRASP01116 189 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 SERPINE2P07093 398 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 TRAPPC2P0DI81 140 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 TRAPPC2BP0DI82 140 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 C8orf88P0DMB2 117 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 NAT1P18440 290 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 F2RP25116 425 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 LPAR6P43657 344 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 TAS2R46P59540 309 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 NCS1P62166 190 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 EWSR1Q01844 656 aaKnown RBP eCLIP9.2□□□□□ -0.94
TPM3-204ENST00000323144 ODF3L2Q3SX64 289 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 UBAC2Q8NBM4 344 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 OR1L6Q8NGR2 347 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 LSM10Q969L4 123 aaKnown RBP9.2□□□□□ -0.94
TPM3-204ENST00000323144 NDUFA4L2Q9NRX3 87 aa9.2□□□□□ -0.94
TPM3-204ENST00000323144 F11RQ9Y624 299 aaKnown RBP9.2□□□□□ -0.94
TPM3-204ENST00000323144 C15orf61A6NNL5 157 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 JTBO76095 146 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 FGF2P09038 288 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 PTBP1P26599 531 aaKnown RBP eCLIP9.19□□□□□ -0.942e-9■■■■■ 36.6
TPM3-204ENST00000323144 HLA-DMAP28067 261 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 ADMP35318 185 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 RNASE12Q5GAN4 147 aaKnown RBP9.19□□□□□ -0.94
TPM3-204ENST00000323144 THOC7Q6I9Y2 204 aaKnown RBP9.19□□□□□ -0.94
TPM3-204ENST00000323144 OR1L8Q8NGR8 309 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 CD300LFQ8TDQ1 290 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 VN1R17PQ8TDU5 208 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 MARC2Q969Z3 335 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 DGCR14Q96DF8 476 aaKnown RBP9.19□□□□□ -0.94
TPM3-204ENST00000323144 S100A16Q96FQ6 103 aaKnown RBP9.19□□□□□ -0.94
TPM3-204ENST00000323144 OVOL2Q9BRP0 275 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 AIFM2Q9BRQ8 373 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 UFC1Q9Y3C8 167 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 OR51B2Q9Y5P1 312 aa9.19□□□□□ -0.94
TPM3-204ENST00000323144 LOC102724200A0A096LPH7 203 aaPredicted RBP9.18□□□□□ -0.94
TPM3-204ENST00000323144 GPR31O00270 319 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 IGKV1-39P01597 117 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 IGKV1D-39P04432 117 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 PMS2P11Q13670 270 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 DEFB135Q30KP9 77 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 SLC25A24Q6NUK1 477 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 DHRS11Q6UWP2 260 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 SNX29P2Q8IUI4 249 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 GPX8Q8TED1 209 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 SCARB1Q8WTV0 552 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 SLC25A46Q96AG3 418 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 BSCL2Q96G97 398 aaPredicted RBP9.18□□□□□ -0.94
TPM3-204ENST00000323144 C20orf24Q9BUV8 137 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 DAZ1Q9NQZ3 744 aaKnown RBP9.18□□□□□ -0.94
TPM3-204ENST00000323144 C21orf62Q9NYP8 219 aa9.18□□□□□ -0.94
TPM3-204ENST00000323144 MRPL27Q9P0M9 148 aaKnown RBP9.18□□□□□ -0.94
TPM3-204ENST00000323144 TRAV25A0A0B4J276 109 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 TMEM127O75204 238 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 IGHV3-48P01763 117 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 PRSS3P35030 304 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 ELLP55199 621 aaPredicted RBP9.17□□□□□ -0.94
TPM3-204ENST00000323144 IZUMO4Q1ZYL8 232 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 Q56UQ5 140 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 SPINK9Q5DT21 86 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 RBPMS2Q6ZRY4 209 aaKnown RBP9.17□□□□□ -0.94
TPM3-204ENST00000323144 TBC1D26Q86UD7 250 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 LYSMD2Q8IV50 215 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 CROCCP3Q8IVE0 287 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 BORCS5Q969J3 196 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms