RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 WIPI1Q5MNZ9 446 aaPredicted RBP8.38□□□□□ -1.07
COL12A1-201ENST00000322507 FER1L6-AS1Q8NA97 138 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 FRRS1LQ9P0K9 344 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 CHTOPQ9Y3Y2 248 aaKnown RBP8.38□□□□□ -1.07
COL12A1-201ENST00000322507 PRTN3P24158 256 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 GPR6P46095 362 aaPredicted RBP8.38□□□□□ -1.07
COL12A1-201ENST00000322507 EWSR1Q01844 656 aaKnown RBP eCLIP8.38□□□□□ -1.07
COL12A1-201ENST00000322507 IRF3Q14653 427 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 TNXAQ16473 311 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 ZNF683Q8IZ20 524 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 NRN1Q9NPD7 142 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 A6NNC1 897 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 TOMM40O96008 361 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 RTN4RQ9BZR6 473 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 RETNQ9HD89 108 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 TMSB15BA0A087X1C1 80 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 COX5BP10606 129 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 CD5LO43866 347 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 DANCRP0C864 163 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 Q71RC1 249 aaPredicted RBP8.37□□□□□ -1.07
COL12A1-201ENST00000322507 TMEM86BQ8N661 226 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 GCSAMQ8N6F7 178 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 HILPDAQ9Y5L2 63 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 IGHV5-51A0A0C4DH38 117 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 CXCL3P19876 107 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 EFNB2P52799 333 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 MMD2Q8IY49 270 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 C1QTNF4Q9BXJ3 329 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 TMEM170AQ8WVE7 144 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 ABHD17AQ96GS6 310 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 TLNRD1Q9H1K6 362 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 LIMS1P48059 325 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 LINC01555Q8NAE3 123 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 BRK1Q8WUW1 75 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 ABHD14AQ9BUJ0 271 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 TET2Q6N021 2002 aaPredicted RBP8.37□□□□□ -1.07
COL12A1-201ENST00000322507 FNDC10F2Z333 226 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 DUSP15Q9H1R2 295 aaPredicted RBP8.37□□□□□ -1.07
COL12A1-201ENST00000322507 HS3ST3B1Q9Y662 390 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 ATOX1O00244 68 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 HYPMO75409 117 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 CD300CQ08708 224 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 PGLYRP4Q96LB8 373 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 VSIG4Q9Y279 399 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 TCTEX1D4Q5JR98 221 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 PGLYRP3Q96LB9 341 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 SARGQ9BW04 601 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 GRIFINA4D1Z8 144 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 C5orf67F2Z3F1 127 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 FAM106CPP0CH98 169 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 TRIP6Q15654 476 aaKnown RBP8.37□□□□□ -1.07
COL12A1-201ENST00000322507 GAPTQ8N292 157 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 TMUB1Q9BVT8 246 aa8.37□□□□□ -1.07
COL12A1-201ENST00000322507 TSPOP30536 169 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 RPS27P42677 84 aaKnown RBP8.36□□□□□ -1.07
COL12A1-201ENST00000322507 NCOA6Q14686 2063 aaPredicted RBP8.36□□□□□ -1.07
COL12A1-201ENST00000322507 EML5Q05BV3 1969 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 LOXL4Q96JB6 756 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 PGPA6NDG6 321 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 TDGF1P3P51864 188 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 A0A1W2PRD5 423 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 NDUFB4O95168 129 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 LIFP15018 202 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 PPP1R27Q86WC6 154 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 FFAR1O14842 300 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 TAX1BP3O14907 124 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 TMEM50BP56557 158 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 C8orf82Q6P1X6 216 aaPredicted RBP8.36□□□□□ -1.07
COL12A1-201ENST00000322507 TMEM78Q5T7P6 136 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 BRWD3Q6RI45 1802 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 ZNF688P0C7X2 276 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 GPR82Q96P67 336 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 FOXQ1Q9C009 403 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 MGAMO43451 1857 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 TRBV5-3A0A0A0MS03 114 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 ADMP35318 185 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 ZNF645Q8N7E2 425 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 UBE2E2Q96LR5 201 aa8.36□□□□□ -1.07
COL12A1-201ENST00000322507 MRPL32Q9BYC8 188 aaKnown RBP8.36□□□□□ -1.07
COL12A1-201ENST00000322507 B5MCH6 92 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 ITGBL1O95965 494 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-201ENST00000322507 ZNF660Q6AZW8 331 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-201ENST00000322507 EBLN2Q6P2I7 272 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 MBNL3Q9NUK0 354 aaKnown RBP8.35□□□□□ -1.07
COL12A1-201ENST00000322507 ACYP1P07311 99 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 AHRRA9YTQ3 701 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 C16orf97H3BN30 126 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 EML2O95834 649 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 CXCL5P42830 114 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 VN1R4Q7Z5H5 301 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 IL36BQ9NZH7 164 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 TMEM222Q9H0R3 208 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 CXCL16Q9H2A7 254 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 GP6Q9HCN6 339 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 IGHV1OR15-9A0A0B4J2B8 117 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 PTGDSP41222 190 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 KIR3DS1Q14943 382 aa8.35□□□□□ -1.07
COL12A1-201ENST00000322507 SLC25A10Q9UBX3 287 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-201ENST00000322507 FGF12P61328 243 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms