RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 HLA-DMBP28068 263 aa14.24□□□□□ -0.13
SSNA1-201ENST00000322310 FABP5Q01469 135 aa14.24□□□□□ -0.13
SSNA1-201ENST00000322310 SLC25A24Q6NUK1 477 aa14.24□□□□□ -0.13
SSNA1-201ENST00000322310 SPSB3Q6PJ21 355 aa14.24□□□□□ -0.13
SSNA1-201ENST00000322310 ZNF66Q6ZN08 573 aa14.24□□□□□ -0.13
SSNA1-201ENST00000322310 Q6ZTC4 211 aa14.24□□□□□ -0.13
SSNA1-201ENST00000322310 GDPD1Q8N9F7 314 aa14.24□□□□□ -0.13
SSNA1-201ENST00000322310 ZNF414Q96IQ9 312 aa14.24□□□□□ -0.13
SSNA1-201ENST00000322310 COMMD5Q9GZQ3 224 aa14.24□□□□□ -0.13
SSNA1-201ENST00000322310 HRH4Q9H3N8 390 aa14.24□□□□□ -0.13
SSNA1-201ENST00000322310 C15orf62A8K5M9 175 aa14.23□□□□□ -0.13
SSNA1-201ENST00000322310 UPK2O00526 184 aa14.23□□□□□ -0.13
SSNA1-201ENST00000322310 CHEK1O14757 476 aa14.23□□□□□ -0.13
SSNA1-201ENST00000322310 RBMY1A1P0DJD3 496 aaKnown RBP14.23□□□□□ -0.13
SSNA1-201ENST00000322310 RBMY1CP0DJD4 496 aa14.23□□□□□ -0.13
SSNA1-201ENST00000322310 RBMY1FQ15415 496 aaKnown RBP14.23□□□□□ -0.13
SSNA1-201ENST00000322310 SPAG16Q8N0X2 631 aa14.23□□□□□ -0.13
SSNA1-201ENST00000322310 PACRGLQ8N7B6 248 aa14.23□□□□□ -0.13
SSNA1-201ENST00000322310 SRSF8Q9BRL6 282 aaKnown RBP14.23□□□□□ -0.13
SSNA1-201ENST00000322310 QTRT1Q9BXR0 403 aaKnown RBP14.23□□□□□ -0.13
SSNA1-201ENST00000322310 C21orf62Q9NYP8 219 aa14.23□□□□□ -0.13
SSNA1-201ENST00000322310 IGHV4-28A0A0C4DH34 117 aa14.22□□□□□ -0.13
SSNA1-201ENST00000322310 IGHV7-4-1A0A0J9YVY3 117 aa14.22□□□□□ -0.13
SSNA1-201ENST00000322310 MRPS14O60783 128 aaKnown RBP14.22□□□□□ -0.13
SSNA1-201ENST00000322310 OR13C7P0DN81 318 aa14.22□□□□□ -0.13
SSNA1-201ENST00000322310 RAB6AP20340 208 aa14.22□□□□□ -0.13
SSNA1-201ENST00000322310 RANBP1P43487 201 aa14.22□□□□□ -0.13
SSNA1-201ENST00000322310 CMC4P56277 68 aaPredicted RBP14.22□□□□□ -0.13
SSNA1-201ENST00000322310 WT1-ASQ06250 92 aa14.22□□□□□ -0.13
SSNA1-201ENST00000322310 CDNFQ49AH0 187 aa14.22□□□□□ -0.13
SSNA1-201ENST00000322310 TMEM116Q8NCL8 245 aa14.22□□□□□ -0.13
SSNA1-201ENST00000322310 SCARB1Q8WTV0 552 aa14.22□□□□□ -0.13
SSNA1-201ENST00000322310 CCL28Q9NRJ3 127 aa14.22□□□□□ -0.13
SSNA1-201ENST00000322310 IGHV3OR16-13A0A075B7E8 117 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 IGHV3-74A0A0B4J1X5 117 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 TRAV10A0A0B4J240 114 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 METTL21EPA6NDL7 271 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 CYB5BO43169 146 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 SERPINE2P07093 398 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 TRAM1Q15629 374 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 LEMD1Q68G75 181 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 CNIH2Q6PI25 160 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 NR2C2APQ86WQ0 139 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 ZNF575Q86XF7 245 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 NUDCD2Q8WVJ2 157 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 ATG5Q9H1Y0 275 aa14.21□□□□□ -0.13
SSNA1-201ENST00000322310 HSPG2P98160 4391 aa14.2□□□□□ -0.14
SSNA1-201ENST00000322310 IFITM5A6NNB3 132 aa14.2□□□□□ -0.14
SSNA1-201ENST00000322310 C15orf61A6NNL5 157 aa14.2□□□□□ -0.14
SSNA1-201ENST00000322310 SULT1C2O00338 296 aa14.2□□□□□ -0.14
SSNA1-201ENST00000322310 PSMA1P25786 263 aaKnown RBP14.2□□□□□ -0.14
SSNA1-201ENST00000322310 Q56UQ5 140 aa14.2□□□□□ -0.14
SSNA1-201ENST00000322310 FAM90A2PQ658T7 463 aa14.2□□□□□ -0.14
SSNA1-201ENST00000322310 PVRIGQ6DKI7 326 aa14.2□□□□□ -0.14
SSNA1-201ENST00000322310 SECTM1Q8WVN6 248 aa14.2□□□□□ -0.14
SSNA1-201ENST00000322310 AIFM2Q9BRQ8 373 aa14.2□□□□□ -0.14
SSNA1-201ENST00000322310 C8orf4Q9NR00 106 aa14.2□□□□□ -0.14
SSNA1-201ENST00000322310 TMEM140Q9NV12 185 aa14.2□□□□□ -0.14
SSNA1-201ENST00000322310 ERICH4A6NGS2 130 aa14.19□□□□□ -0.14
SSNA1-201ENST00000322310 K7EIM0 57 aa14.19□□□□□ -0.14
SSNA1-201ENST00000322310 CTSGP08311 255 aa14.19□□□□□ -0.14
SSNA1-201ENST00000322310 TAS2R31P59538 309 aa14.19□□□□□ -0.14
SSNA1-201ENST00000322310 HACD4Q5VWC8 232 aa14.19□□□□□ -0.14
SSNA1-201ENST00000322310 ZNF773Q6PK81 442 aa14.19□□□□□ -0.14
SSNA1-201ENST00000322310 POM121L12Q8N7R1 296 aa14.19□□□□□ -0.14
SSNA1-201ENST00000322310 DCSTAMPQ9H295 470 aa14.19□□□□□ -0.14
SSNA1-201ENST00000322310 F11RQ9Y624 299 aaKnown RBP14.19□□□□□ -0.14
SSNA1-201ENST00000322310 TEX50A0A1B0GTY4 177 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 YIF1AO95070 293 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 TRAPPC2P0DI81 140 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 TRAPPC2BP0DI82 140 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 NQO2P16083 231 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 DEFB131AP59861 70 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 POU2AF1Q16633 256 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 DMBX1Q8NFW5 382 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 CMTM3Q96MX0 182 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 ATP6V0BQ99437 205 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 RNF126Q9BV68 326 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 PLA2G2EQ9NZK7 142 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 ANXA10Q9UJ72 324 aa14.18□□□□□ -0.14
SSNA1-201ENST00000322310 ELOA3CA0A087WX78 387 aaPredicted RBP14.17□□□□□ -0.14
SSNA1-201ENST00000322310 TMEM235A6NFC5 223 aa14.17□□□□□ -0.14
SSNA1-201ENST00000322310 NUPL2O15504 423 aaKnown RBP14.17□□□□□ -0.14
SSNA1-201ENST00000322310 RBFOX2O43251 390 aaKnown RBP eCLIP14.17□□□□□ -0.14
SSNA1-201ENST00000322310 SSX5O60225 188 aa14.17□□□□□ -0.14
SSNA1-201ENST00000322310 GIG44P09565 113 aaPredicted RBP14.17□□□□□ -0.14
SSNA1-201ENST00000322310 PTHLHP12272 177 aa14.17□□□□□ -0.14
SSNA1-201ENST00000322310 ARL6IP1Q15041 203 aa14.17□□□□□ -0.14
SSNA1-201ENST00000322310 TCF24Q7RTU0 167 aa14.17□□□□□ -0.14
SSNA1-201ENST00000322310 FAM24BQ8N5W8 94 aa14.17□□□□□ -0.14
SSNA1-201ENST00000322310 GIMAP1Q8WWP7 306 aa14.17□□□□□ -0.14
SSNA1-201ENST00000322310 OR10C1Q96KK4 312 aa14.17□□□□□ -0.14
SSNA1-201ENST00000322310 HINT2Q9BX68 163 aa14.17□□□□□ -0.14
SSNA1-201ENST00000322310 PDCD5O14737 125 aa14.16□□□□□ -0.14
SSNA1-201ENST00000322310 HPRT1P00492 218 aa14.16□□□□□ -0.14
SSNA1-201ENST00000322310 MLLT11Q13015 90 aaPredicted RBP14.16□□□□□ -0.14
SSNA1-201ENST00000322310 ZNF767PQ75MW2 155 aa14.16□□□□□ -0.14
SSNA1-201ENST00000322310 OR13F1Q8NGS4 319 aa14.16□□□□□ -0.14
SSNA1-201ENST00000322310 SCRT1Q9BWW7 348 aa14.16□□□□□ -0.14
SSNA1-201ENST00000322310 ACOT13Q9NPJ3 140 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms