RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 ZNF841Q6ZN19 808 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 SCNM1Q9BWG6 230 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 WNK1Q9H4A3 2382 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 IGHV3-35A0A0C4DH35 117 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 C5orf52A6NGY3 159 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 TCF21O43680 179 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 RAMP3O60896 148 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 OTX1P32242 354 aaPredicted RBP12.96□□□□□ -0.33
GCFC2-201ENST00000321027 GPR6P46095 362 aaPredicted RBP12.96□□□□□ -0.33
GCFC2-201ENST00000321027 PSMB2P49721 201 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 HGFACQ04756 655 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 GFI1BQ5VTD9 330 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 TXNDC17Q9BRA2 123 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.96□□□□□ -0.33
GCFC2-201ENST00000321027 REG1AP05451 166 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 ATP5G3P48201 142 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 DNM1P46Q6ZS02 220 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 GGNQ86UU5 652 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 GCSAMQ8N6F7 178 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 RBM14Q96PK6 669 aaKnown RBP12.96□□□□□ -0.33
GCFC2-201ENST00000321027 ARFGEF3Q5TH69 2177 aa12.96□□□□□ -0.33
GCFC2-201ENST00000321027 GCGP01275 180 aa12.96□□□□□ -0.34
GCFC2-201ENST00000321027 CXCL1P09341 107 aa12.96□□□□□ -0.34
GCFC2-201ENST00000321027 HOXB1P14653 301 aaPredicted RBP12.96□□□□□ -0.34
GCFC2-201ENST00000321027 CFPP27918 469 aa12.96□□□□□ -0.34
GCFC2-201ENST00000321027 PAFAH1B2P68402 229 aa12.96□□□□□ -0.34
GCFC2-201ENST00000321027 HEPN1Q6WQI6 88 aa12.96□□□□□ -0.34
GCFC2-201ENST00000321027 MRPL18Q9H0U6 180 aaKnown RBP12.96□□□□□ -0.34
GCFC2-201ENST00000321027 WIPF3A6NGB9 483 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 RRHO14718 337 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 MC5RP33032 325 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 TMEM183AQ8IXX5 376 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 CGB1A6NKQ9 187 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 HINT1P49773 126 aaPredicted RBP12.95□□□□□ -0.34
GCFC2-201ENST00000321027 MMD2Q8IY49 270 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 PTPRQQ9UMZ3 2332 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 A0A087WWC5 75 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 UBE2CO00762 179 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 Q0VFX4 171 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 COL5A1-AS1Q5SY13 56 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 OR4A5Q8NH83 315 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 HSPB7Q9UBY9 170 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 MRPS18CQ9Y3D5 142 aaKnown RBP12.95□□□□□ -0.34
GCFC2-201ENST00000321027 MUC6Q6W4X9 2439 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 CCDC144NLQ6NUI1 221 aa12.95□□□□□ -0.34
GCFC2-201ENST00000321027 RNF166Q96A37 237 aaPredicted RBP12.95□□□□□ -0.34
GCFC2-201ENST00000321027 SSBP3Q9BWW4 388 aaPredicted RBP12.95□□□□□ -0.34
GCFC2-201ENST00000321027 SLC17A3O00476 420 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 C8orf88P0DMB2 117 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 SRIP30626 198 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 ZNF430Q9H8G1 570 aaPredicted RBP12.94□□□□□ -0.34
GCFC2-201ENST00000321027 DNAJC4Q9NNZ3 241 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 C1QTNF9BB2RNN3 333 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 HLA-DQA1P01909 254 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 NRN1LQ496H8 165 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 NPIPB3Q92617 1050 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 SFRP2Q96HF1 295 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 IMMP2LQ96T52 175 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 AP5S1Q9NUS5 200 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 FAM208BQ5VWN6 2430 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 CECR9P0C854 216 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 RPL23P62829 140 aaKnown RBP12.94□□□□□ -0.34
GCFC2-201ENST00000321027 STPG3Q8N7X2 389 aa12.94□□□□□ -0.34
GCFC2-201ENST00000321027 TMEM177Q53S58 311 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 C1orf174Q8IYL3 243 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 GATAD1Q8WUU5 269 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 WDYHV1Q96HA8 205 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 PGPEP1LA6NFU8 196 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 OR4C46A6NHA9 309 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 SOD3P08294 240 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 TFPI2P48307 235 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 ERVFRD-1P60508 538 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 LBHQ53QV2 105 aaPredicted RBP12.93□□□□□ -0.34
GCFC2-201ENST00000321027 ACP7Q6ZNF0 438 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 MYOZ3Q8TDC0 251 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 NABP2Q9BQ15 211 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 GP6Q9HCN6 339 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 CEACAM1P13688 526 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 FCGR2BP31994 310 aaPredicted RBP12.93□□□□□ -0.34
GCFC2-201ENST00000321027 ARF6P62330 175 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 ATOH7Q8N100 152 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 PGLYRP4Q96LB8 373 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 ZNF729A6NN14 1252 aaPredicted RBP12.93□□□□□ -0.34
GCFC2-201ENST00000321027 COMPP49747 757 aaPredicted RBP12.93□□□□□ -0.34
GCFC2-201ENST00000321027 ZNF324BQ6AW86 544 aaPredicted RBP12.93□□□□□ -0.34
GCFC2-201ENST00000321027 RBPMS2Q6ZRY4 209 aaKnown RBP12.93□□□□□ -0.34
GCFC2-201ENST00000321027 NEU1Q99519 415 aa12.93□□□□□ -0.34
GCFC2-201ENST00000321027 SPSB4Q96A44 273 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 HS3ST6Q96QI5 342 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 JPT1Q9UK76 154 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 A6NDN8 102 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 DLL1O00548 723 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 LEPROTL1O95214 131 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 GCHFRP30047 84 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 KIR2DL2P43627 348 aaPredicted RBP12.92□□□□□ -0.34
GCFC2-201ENST00000321027 UQCRFS1P47985 274 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 DLX1P56177 255 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 TWIST1Q15672 202 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 GCSAMLQ5JQS6 135 aa12.92□□□□□ -0.34
GCFC2-201ENST00000321027 ZNF502Q8TBZ5 544 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms