RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 RPL15P61313 204 aaKnown RBP7.4□□□□□ -1.22
SSBP2-201ENST00000320672 RPS11P62280 158 aaKnown RBP eCLIP7.4□□□□□ -1.22
SSBP2-201ENST00000320672 C1QTNF12Q5T7M4 302 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 A0A0G2JK05 382 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 RCC1LQ96I51 464 aaKnown RBP7.4□□□□□ -1.22
SSBP2-201ENST00000320672 UBE2E2Q96LR5 201 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 TRGV2A0A075B6R0 118 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 TRAV3A0A0B4J244 114 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 TRAV40A0A0B4J280 105 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 LOC390937A0A1W2PQ73 354 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 IL17RELQ6ZVW7 336 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 NPCDR1Q9BY65 106 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 IGKV2-40A0A087WW87 121 aaPredicted RBP7.4□□□□□ -1.22
SSBP2-201ENST00000320672 IGKV2D-40P01614 121 aaPredicted RBP7.4□□□□□ -1.22
SSBP2-201ENST00000320672 CTHRC1Q96CG8 243 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 NBEAP1P0C6P0 100 aa7.4□□□□□ -1.23
SSBP2-201ENST00000320672 OR9G9P0C7N8 305 aa7.4□□□□□ -1.23
SSBP2-201ENST00000320672 ZNF585BQ52M93 769 aa7.4□□□□□ -1.23
SSBP2-201ENST00000320672 SYT8Q8NBV8 401 aa7.4□□□□□ -1.23
SSBP2-201ENST00000320672 EEF1AKMT3Q96AZ1 226 aa7.4□□□□□ -1.23
SSBP2-201ENST00000320672 WDYHV1Q96HA8 205 aa7.4□□□□□ -1.23
SSBP2-201ENST00000320672 NFAM1Q8NET5 270 aaPredicted RBP7.4□□□□□ -1.23
SSBP2-201ENST00000320672 C10orf35Q96D05 121 aa7.4□□□□□ -1.23
SSBP2-201ENST00000320672 DDA1Q9BW61 102 aa7.4□□□□□ -1.23
SSBP2-201ENST00000320672 GCGP01275 180 aa7.4□□□□□ -1.23
SSBP2-201ENST00000320672 TDGF1P13385 188 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 FSTP19883 344 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 GNLYP22749 145 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 ADMP35318 185 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 PRR30Q53SZ7 412 aaPredicted RBP7.39□□□□□ -1.23
SSBP2-201ENST00000320672 FNDC4Q9H6D8 234 aaPredicted RBP7.39□□□□□ -1.23
SSBP2-201ENST00000320672 MC5RP33032 325 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 C1orf100Q5SVJ3 147 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 PRELID3AQ96N28 172 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 SAA2-SAA4A0A096LPE2 208 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 PEX7O00628 323 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 EFEMP2O95967 443 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 CD7P09564 240 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 SAA2P0DJI9 122 aaPredicted RBP7.39□□□□□ -1.23
SSBP2-201ENST00000320672 CFHR3Q02985 330 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 ITGB4P16144 1822 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 EFNA2O43921 213 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 APOBEC3AP31941 199 aaPredicted RBP7.39□□□□□ -1.23
SSBP2-201ENST00000320672 ZBTB34Q8NCN2 500 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 GGACTQ9BVM4 153 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 PRB1P04280 392 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 DNASE2BQ8WZ79 361 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 IFI27L2Q9H2X8 130 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 RPUSD1Q9UJJ7 312 aaKnown RBP7.39□□□□□ -1.23
SSBP2-201ENST00000320672 PAPPA2Q9BXP8 1791 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 ARID1AO14497 2285 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 IGKV1-9A0A0C4DH69 117 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 NAPSAO96009 420 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 TMEM45BQ96B21 275 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 JPT1Q9UK76 154 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 F5P12259 2224 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.39□□□□□ -1.23
SSBP2-201ENST00000320672 ZNF729A6NN14 1252 aaPredicted RBP7.39□□□□□ -1.23
SSBP2-201ENST00000320672 NPIPB6E9PJ23 425 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 TSPAN13O95857 204 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 NUDT10Q8NFP7 164 aa7.39□□□□□ -1.23
SSBP2-201ENST00000320672 CDK5RAP2Q96SN8 1893 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 ZNF138P52744 262 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 FAM168AQ92567 244 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 HLA-DRB1P01911 266 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 NPIPB4C9JG80 1138 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 SCGB3A1Q96QR1 104 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 Q9H3A6 140 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 CRIM1Q9NZV1 1036 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 TMEM136Q6ZRR5 245 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 SCRT1Q9BWW7 348 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 SLC25A39Q9BZJ4 359 aaPredicted RBP7.38□□□□□ -1.23
SSBP2-201ENST00000320672 SEMA5BQ9P283 1151 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 ZNF474Q6S9Z5 364 aaPredicted RBP7.38□□□□□ -1.23
SSBP2-201ENST00000320672 PHLDA1Q8WV24 401 aaPredicted RBP7.38□□□□□ -1.23
SSBP2-201ENST00000320672 TNFRSF18Q9Y5U5 241 aa7.38□□□□□ -1.23
SSBP2-201ENST00000320672 FOXL1Q12952 345 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 LAMTOR1Q6IAA8 161 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 OR52E5Q8NH55 327 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 ZNF625Q96I27 306 aaPredicted RBP7.37□□□□□ -1.23
SSBP2-201ENST00000320672 MARF1Q9Y4F3 1742 aaKnown RBP7.37□□□□□ -1.23
SSBP2-201ENST00000320672 TRAV2A0A0B4J234 112 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 A0A1W2PS18 150 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 NPIPB13A6NJU9 1138 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 NPIPB5A8MRT5 1133 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 SLC25A34Q6PIV7 304 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 RPRMLQ8N4K4 120 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 Q8TAT8 98 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 IGHV1-18A0A0C4DH31 117 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 SMKR1H3BMG3 65 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 TIMM23O14925 209 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 DDTP30046 118 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 SERF2P84101 59 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 TIMM23BQ5SRD1 257 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 EXOC3-AS1Q8N2X6 119 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 PGPEP1Q9NXJ5 209 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 LEPP41159 167 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 Q6ZT83 130 aa7.37□□□□□ -1.23
SSBP2-201ENST00000320672 SIPA1L3O60292 1781 aaPredicted RBP7.37□□□□□ -1.23
SSBP2-201ENST00000320672 RNF222A6NCQ9 220 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms