RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 PAGE4O60829 102 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 HOXA5P20719 270 aa11.6□□□□□ -0.55
VRK3-201ENST00000316763 HSPE1P61604 102 aaKnown RBP11.6□□□□□ -0.55
VRK3-201ENST00000316763 TET2Q6N021 2002 aaPredicted RBP11.6□□□□□ -0.55
VRK3-201ENST00000316763 HRNRQ86YZ3 2850 aaPredicted RBP11.6□□□□□ -0.55
VRK3-201ENST00000316763 PPOXP50336 477 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 NDUFA6P56556 154 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 HIST2H2BCQ6DN03 193 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 OR4A47Q6IF82 309 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 TREML4Q6UXN2 200 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 ABHD12Q8N2K0 398 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 ZNF439Q8NDP4 499 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 PARLQ9H300 379 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 TMEM14BQ9NUH8 114 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 DCAF16Q9NXF7 216 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 DCHS2Q6V1P9 2916 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 ARFGEF3Q5TH69 2177 aa11.59□□□□□ -0.55
VRK3-201ENST00000316763 TRBV24-1A0A075B6N3 115 aa11.58□□□□□ -0.55
VRK3-201ENST00000316763 PDE6DO43924 150 aa11.58□□□□□ -0.55
VRK3-201ENST00000316763 GOSR1O95249 250 aa11.58□□□□□ -0.55
VRK3-201ENST00000316763 S100PP25815 95 aa11.58□□□□□ -0.55
VRK3-201ENST00000316763 POU2AF1Q16633 256 aa11.58□□□□□ -0.55
VRK3-201ENST00000316763 DUX4L9Q6RFH8 374 aaPredicted RBP11.58□□□□□ -0.55
VRK3-201ENST00000316763 C1orf229Q6ZS94 237 aaPredicted RBP11.58□□□□□ -0.55
VRK3-201ENST00000316763 Q8N7P7 452 aa11.58□□□□□ -0.55
VRK3-201ENST00000316763 NPVFQ9HCQ7 196 aa11.58□□□□□ -0.55
VRK3-201ENST00000316763 CBLN4Q9NTU7 201 aa11.58□□□□□ -0.55
VRK3-201ENST00000316763 RPUSD1Q9UJJ7 312 aaKnown RBP11.58□□□□□ -0.55
VRK3-201ENST00000316763 PRNDQ9UKY0 176 aa11.58□□□□□ -0.55
VRK3-201ENST00000316763 CRYBG3Q68DQ2 2970 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 TRAV38-1A0A0B4J264 116 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 C11orf94C9JXX5 98 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 PRSS46E5RG02 174 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 TMEM178BH3BS89 294 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 VENTXO95231 258 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 NPY1RP25929 384 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 GNG10P50151 68 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 RPL23P62829 140 aaKnown RBP11.58□□□□□ -0.56
VRK3-201ENST00000316763 RAB31Q13636 194 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 RTL8BQ17RB0 113 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 C11orf71Q6IPW1 123 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 DTX2Q86UW9 622 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 FAM216BQ8N7L0 139 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 ZNF383Q8NA42 475 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 OR10A7Q8NGE5 316 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 NANPQ8TBE9 248 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 GATAD1Q8WUU5 269 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 OR5B12Q96R08 314 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 TXNDC17Q9BRA2 123 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 TMEM106BQ9NUM4 274 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 DOK5Q9P104 306 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 LINC00312Q9Y6C7 94 aa11.58□□□□□ -0.56
VRK3-201ENST00000316763 CLN5O75503 358 aa11.57□□□□□ -0.56
VRK3-201ENST00000316763 TRGC2P03986 189 aa11.57□□□□□ -0.56
VRK3-201ENST00000316763 NDUFB7P17568 137 aa11.57□□□□□ -0.56
VRK3-201ENST00000316763 CDX1P47902 265 aaPredicted RBP11.57□□□□□ -0.56
VRK3-201ENST00000316763 MEF2CQ06413 473 aaPredicted RBP11.57□□□□□ -0.56
VRK3-201ENST00000316763 SLC25A48Q6ZT89 311 aaKnown RBP11.57□□□□□ -0.56
VRK3-201ENST00000316763 TCF23Q7RTU1 214 aa11.57□□□□□ -0.56
VRK3-201ENST00000316763 SLC16A13Q7RTY0 426 aa11.57□□□□□ -0.56
VRK3-201ENST00000316763 C16orf82Q7Z2V1 217 aa11.57□□□□□ -0.56
VRK3-201ENST00000316763 SLC24A4Q8NFF2 622 aa11.57□□□□□ -0.56
VRK3-201ENST00000316763 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
VRK3-201ENST00000316763 GAL3ST2Q9H3Q3 398 aa11.57□□□□□ -0.56
VRK3-201ENST00000316763 PXMP4Q9Y6I8 212 aa11.57□□□□□ -0.56
VRK3-201ENST00000316763 YLPM1P49750 1951 aaKnown RBP11.57□□□□□ -0.56
VRK3-201ENST00000316763 F6UZH7 168 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 H7BYZ3 331 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 SOD3P08294 240 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 UTF1Q5T230 341 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 CCL17Q92583 94 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 MGST2Q99735 147 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 GGTLC1Q9BX51 225 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 OR51B2Q9Y5P1 312 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 LRBAP50851 2863 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 IGHV1-69-2A0A0G2JMI3 117 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 FNDC10F2Z333 226 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 TMPRSS2O15393 492 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 HIST1H2BKO60814 126 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 YIF1AO95070 293 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 CXorf1O96002 111 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 HIST1H2BJP06899 126 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 HIST1H2BOP23527 126 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 S100A2P29034 98 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 HIST1H2BBP33778 126 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 HIST1H2BDP58876 126 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 HIST1H2BCP62807 126 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 HIST2H2BEQ16778 126 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.56□□□□□ -0.56
VRK3-201ENST00000316763 CST9LP1Q5W188 147 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 TEPPQ6URK8 271 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 HIST1H2BHQ93079 126 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 HIST1H2BNQ99877 126 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 HIST1H2BMQ99879 126 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 PATZ1Q9HBE1 687 aaKnown RBP11.56□□□□□ -0.56
VRK3-201ENST00000316763 SLC35D1Q9NTN3 355 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 FKBP11Q9NYL4 201 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 SLC25A10Q9UBX3 287 aaPredicted RBP11.56□□□□□ -0.56
VRK3-201ENST00000316763 ZNF257Q9Y2Q1 563 aa11.56□□□□□ -0.56
VRK3-201ENST00000316763 PTPN13Q12923 2485 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms