RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 HOXA1P49639 335 aaPredicted RBP12.66□□□□□ -0.38
CALR-201ENST00000316448 RPS16P62249 146 aaKnown RBP12.66□□□□□ -0.38
CALR-201ENST00000316448 DEFA5Q01523 94 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 GUCA2BQ16661 112 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 MRGPRG-AS1Q2M3A8 158 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 MOB3BQ86TA1 216 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 HEYLQ9NQ87 328 aaPredicted RBP12.66□□□□□ -0.38
CALR-201ENST00000316448 RPRMQ9NS64 109 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 KIAA1456Q9P272 454 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 PTPN13Q12923 2485 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 CNTFRP26992 372 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 HTR1DP28221 377 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 FBLN7Q53RD9 439 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 RPEQ96AT9 228 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 PBDC1Q9BVG4 233 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 HILPDAQ9Y5L2 63 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 OR51B2Q9Y5P1 312 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 POLQO75417 2590 aa12.66□□□□□ -0.38
CALR-201ENST00000316448 TNCP24821 2201 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 RRHO14718 337 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 TOX4O94842 621 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 IFNA10P01566 189 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 MC5RP33032 325 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 CCL20P78556 96 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 PRCDQ00LT1 54 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 CLEC12BQ2HXU8 276 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 OR4C13Q8NGP0 309 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 AJUBAQ96IF1 538 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 GGACTQ9BVM4 153 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 VSIRQ9H7M9 311 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 TPSG1Q9NRR2 321 aa12.65□□□□□ -0.38
CALR-201ENST00000316448 AMMECR1Q9Y4X0 333 aaPredicted RBP12.65□□□□□ -0.38
CALR-201ENST00000316448 NBPF19A0A087WUL8 3843 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 KBTBD11O94819 623 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 HBE1P02100 147 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 OPN1MWP04001 364 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 OPN1MW2P0DN77 364 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 OPN1MW3P0DN78 364 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 FGF7P21781 194 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 RAB13P51153 203 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 PEA15Q15121 130 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 ZNF726P1Q15940 193 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 TMEM41BQ5BJD5 291 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 RCC1LQ96I51 464 aaKnown RBP12.64□□□□□ -0.39
CALR-201ENST00000316448 NPCDR1Q9BY65 106 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 NKX6-2Q9C056 277 aaPredicted RBP12.64□□□□□ -0.39
CALR-201ENST00000316448 A0A096LNT2 108 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 A0A1B0GV50 99 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 E7EUB6 86 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 TIMM23O14925 209 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 PAX8Q06710 450 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 BTN1A1Q13410 526 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 SLC24A4Q8NFF2 622 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 OR5B3Q8NH48 314 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 SFT2D1Q8WV19 159 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 CFHR4Q92496 578 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 EIF5A2Q9GZV4 153 aaKnown RBP12.64□□□□□ -0.39
CALR-201ENST00000316448 SMDT1Q9H4I9 107 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 WDR83OSQ9Y284 106 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 SVEP1Q4LDE5 3571 aa12.64□□□□□ -0.39
CALR-201ENST00000316448 TEX50A0A1B0GTY4 177 aa12.63□□□□□ -0.39
CALR-201ENST00000316448 CD1BP29016 333 aa12.63□□□□□ -0.39
CALR-201ENST00000316448 PPT1P50897 306 aa12.63□□□□□ -0.39
CALR-201ENST00000316448 ETV3LQ6ZN32 361 aa12.63□□□□□ -0.39
CALR-201ENST00000316448 SUN5Q8TC36 379 aa12.63□□□□□ -0.39
CALR-201ENST00000316448 MBD3L1Q8WWY6 194 aa12.63□□□□□ -0.39
CALR-201ENST00000316448 FKBP11Q9NYL4 201 aa12.63□□□□□ -0.39
CALR-201ENST00000316448 CRYGBP07316 175 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 CD24P25063 80 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 NPY1RP25929 384 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 DSCR9P59020 149 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 RAB11AP62491 216 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 DLK1P80370 383 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 ACSM6Q6P461 480 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 SSX7Q7RTT5 188 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 OR4A5Q8NH83 315 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 CENPEQ02224 2701 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 CGB1A6NKQ9 187 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 SLC25A17O43808 307 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 IGKV1D-33P01593 117 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 IGKV1-33P01594 117 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 USF1P22415 310 aaPredicted RBP12.62□□□□□ -0.39
CALR-201ENST00000316448 ELLP55199 621 aaPredicted RBP12.62□□□□□ -0.39
CALR-201ENST00000316448 SSX2Q16385 188 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 BSXQ3C1V8 233 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 VSTM2AQ8TAG5 236 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 TMEM167AQ8TBQ9 72 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 PLEKHA3Q9HB20 300 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 ENY2Q9NPA8 101 aa12.62□□□□□ -0.39
CALR-201ENST00000316448 RBFOX3A6NFN3 312 aa12.61□□□□□ -0.39
CALR-201ENST00000316448 MPDU1O75352 247 aa12.61□□□□□ -0.39
CALR-201ENST00000316448 RAB2AP61019 212 aa12.61□□□□□ -0.39
CALR-201ENST00000316448 DEFB113Q30KQ7 82 aa12.61□□□□□ -0.39
CALR-201ENST00000316448 RPP25LQ8N5L8 163 aaKnown RBP12.61□□□□□ -0.39
CALR-201ENST00000316448 ZNF430Q9H8G1 570 aaPredicted RBP12.61□□□□□ -0.39
CALR-201ENST00000316448 TMA7Q9Y2S6 64 aaKnown RBP12.61□□□□□ -0.39
CALR-201ENST00000316448 CENPVL3A0A0U1RRI6 287 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 INS-IGF2F8WCM5 200 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 VENTXO95231 258 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms