RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 NPIPB11E5RHQ5 1161 aa11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 TMEM50AO95807 157 aa11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 USF1P22415 310 aaPredicted RBP11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 TMPRSS3P57727 454 aa11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 Q56UQ5 140 aa11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 OR9G1Q8NH87 305 aa11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 MBD3L2Q8NHZ7 208 aaPredicted RBP11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 TXNDC17Q9BRA2 123 aa11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 ATG101Q9BSB4 218 aa11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 FGF23Q9GZV9 251 aaPredicted RBP11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 DLL1O00548 723 aa11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 TIMP3P35625 211 aa11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 MBNL3Q9NUK0 354 aaKnown RBP11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 TM4SF5O14894 197 aa11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 ATXN7O15265 892 aaPredicted RBP11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 ZNF585BQ52M93 769 aa11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 ZNF474Q6S9Z5 364 aaPredicted RBP11.16□□□□□ -0.62
PCDHB9-201ENST00000316105 USF3Q68DE3 2245 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 LOC102724200A0A096LPH7 203 aaPredicted RBP11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 REG1AP05451 166 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 IL6RP08887 468 aaPredicted RBP11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 RND2P52198 227 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 TPPP2P59282 170 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 TMEM183BQ1AE95 376 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 NABP2Q9BQ15 211 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 YLPM1P49750 1951 aaKnown RBP11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 LINC00473A8K010 186 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 PAX5Q02548 391 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 PQLC2Q6ZP29 291 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 CYP2G1PQ6ZSU1 146 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 TUBA4BQ9H853 241 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 TMEM11P17152 192 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 PMCHP20382 165 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 FAM53AQ6NSI3 398 aaPredicted RBP11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 MUC15Q8N387 334 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 OR5AU1Q8NGC0 362 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 TMEM186Q96B77 213 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 PAXXQ9BUH6 204 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 HILPDAQ9Y5L2 63 aa11.15□□□□□ -0.62
PCDHB9-201ENST00000316105 CHD9Q3L8U1 2897 aa11.15□□□□□ -0.63
PCDHB9-201ENST00000316105 CRISP2P16562 243 aa11.15□□□□□ -0.63
PCDHB9-201ENST00000316105 MRPL54Q6P161 138 aaKnown RBP11.15□□□□□ -0.63
PCDHB9-201ENST00000316105 RPRMLQ8N4K4 120 aa11.15□□□□□ -0.63
PCDHB9-201ENST00000316105 OR4F17Q8NGA8 305 aa11.15□□□□□ -0.63
PCDHB9-201ENST00000316105 OR2T6Q8NHC8 308 aa11.15□□□□□ -0.63
PCDHB9-201ENST00000316105 Q8WTZ3 238 aa11.15□□□□□ -0.63
PCDHB9-201ENST00000316105 MRPL20Q9BYC9 149 aaKnown RBP11.15□□□□□ -0.63
PCDHB9-201ENST00000316105 MUC6Q6W4X9 2439 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 COLCA2A8K830 154 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 TRGC1P0CF51 173 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 IGFBP2P18065 325 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 IER3P46695 156 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 Q6ZS92 163 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 MMD2Q8IY49 270 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 PERPQ96FX8 193 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 SPRY4Q9C004 299 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 LINC00312Q9Y6C7 94 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 IGKV1D-17A0A075B6S4 117 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 H0Y8G0 127 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 SIAH2O43255 324 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 GCHFRP30047 84 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 CAMPP49913 170 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 Q6ZR03 302 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 RASL11BQ9BPW5 248 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 SDF2L1Q9HCN8 221 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 ATP5G3P48201 142 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 ARL16Q0P5N6 197 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 KRTAP27-1Q3LI81 207 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 KLHDC1Q8N7A1 406 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 OSR1Q8TAX0 266 aaPredicted RBP11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 PPP1R14DQ9NXH3 145 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 LAMA3Q16787 3333 aa11.14□□□□□ -0.63
PCDHB9-201ENST00000316105 RRHO14718 337 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 RBFOX2O43251 390 aaKnown RBP eCLIP11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 HSBP1O75506 76 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 KHDC1LQ5JSQ8 128 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 Q8NFD4 153 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 OR1L6Q8NGR2 347 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 PPIAL4CA0A0B4J2A2 164 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 SNURFLB1AK76 121 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 B9A039 149 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 PPIAL4GP0DN37 164 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 APOBEC3AP31941 199 aaPredicted RBP11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 ERVK11-1P61568 191 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 SLC35B1P78383 322 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 GCSAMLQ5JQS6 135 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 TMEM14EPQ6UXP3 125 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 MBD3L1Q8WWY6 194 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 NPIPB3Q92617 1050 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 ZNF430Q9H8G1 570 aaPredicted RBP11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 UBTD1Q9HAC8 227 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 A0A087WWC5 75 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 AGAP20933 346 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 SRP14P37108 136 aaKnown RBP11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 ERVFRD-1P60508 538 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 RPP25LQ8N5L8 163 aaKnown RBP11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 CBLN4Q9NTU7 201 aa11.13□□□□□ -0.63
PCDHB9-201ENST00000316105 CRYBB3P26998 211 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms