RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TBPP20226 339 aa11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 RPL5P46777 297 aaKnown RBP11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 RNASE10Q5GAN6 216 aaKnown RBP11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 LPCAT3Q6P1A2 487 aa11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 SBSPONQ8IVN8 264 aa11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 GDPD1Q8N9F7 314 aa11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 TMEM229BQ8NBD8 167 aa11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 ZNF502Q8TBZ5 544 aa11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 SMIM4Q8WVI0 70 aa11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 ASCL2Q99929 193 aa11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 COMMD5Q9GZQ3 224 aa11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 DPPA5A6NC42 116 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 C15orf61A6NNL5 157 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 LGALS9O00182 355 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 OR2C1O95371 312 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 FRMD6-AS1P0C7T7 363 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 NHLRC4P0CG21 123 aaPredicted RBP11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 TRAPPC2P0DI81 140 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 TRAPPC2BP0DI82 140 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 HIST1H1BP16401 226 aaKnown RBP11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 FAAP20Q6NZ36 180 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 CLEC19AQ6UXS0 136 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 GPHB5Q86YW7 130 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 OR1L8Q8NGR8 309 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 ISOC1Q96CN7 298 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 TP53RKQ96S44 253 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 NXF2Q9GZY0 626 aaKnown RBP11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 C19orf73Q9NVV2 129 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 CEPT1Q9Y6K0 416 aa11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 DYNC2H1Q8NCM8 4307 aaKnown RBP11.04□□□□□ -0.64
PPP1CA-201ENST00000312989 TMEM213A2RRL7 107 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 C2orf70A6NJV1 201 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 A8MWP6 167 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 A8MZ25 164 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 CTDSPLO15194 276 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 GGCTO75223 188 aaKnown RBP11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 IGKV1-5P01602 117 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 SERPINE2P07093 398 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 ERVK-16P61578 105 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 FAM209BQ5JX69 171 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 THOC7Q6I9Y2 204 aaKnown RBP11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 UNQ9165/PRO28630Q6UXU0 137 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 LSM10Q969L4 123 aaKnown RBP11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 ZNF486Q96H40 463 aaPredicted RBP11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 RBM38Q9H0Z9 239 aaKnown RBP11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 OR51B2Q9Y5P1 312 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 SORL1Q92673 2214 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 H0Y980 276 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 K7EIM0 57 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 RGS5O15539 181 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 OR13C7P0DN81 318 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 IGHV4-30-4P0DP06 118 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 ARL3P36405 182 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 PPP5CP53041 499 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 PIGPP57054 158 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 TAS2R19P59542 299 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 SSBP1Q04837 148 aaKnown RBP11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 IZUMO4Q1ZYL8 232 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 OR5B3Q8NH48 314 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 C15orf40Q8WUR7 153 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 CACNG8Q8WXS5 425 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 EEF1AKMT3Q96AZ1 226 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 ZC4H2Q9NQZ6 224 aa11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 F11RQ9Y624 299 aaKnown RBP11.03□□□□□ -0.64
PPP1CA-201ENST00000312989 TRBV7-1A0A0A6YYK4 115 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 ZNF785A8K8V0 405 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 DHFRP00374 187 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 CLEC3BP05452 202 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 MRPS10P82664 201 aaKnown RBP11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 DEFB114Q30KQ6 69 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 CD300EQ496F6 205 aaPredicted RBP11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 STEAP1BQ6NZ63 245 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 HSD17B13Q7Z5P4 300 aaPredicted RBP11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 Q8N402 240 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 OR13C8Q8NGS7 320 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 TERB2Q8NHR7 220 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 CXorf58Q96LI9 332 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 PEMTQ9UBM1 199 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 PRNDQ9UKY0 176 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 U3KQK5 164 aa11.02□□□□□ -0.65
PPP1CA-201ENST00000312989 STARD9Q9P2P6 4700 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 A0A0B4J293 547 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 A0A0G2JRQ6 117 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 GSTZ1O43708 216 aaPredicted RBP11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 RAB3DO95716 219 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 DEFA4P12838 97 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 FOLR2P14207 255 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 GPR183P32249 361 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 TATDN3Q17R31 274 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 OR4C16Q8NGL9 310 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 OR2K2Q8NGT1 345 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 MARCH1Q8TCQ1 289 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 VN1R17PQ8TDU5 208 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 TSC22D3Q99576 134 aa11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 RTBDNQ9BSG5 229 aaPredicted RBP11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 ZNF436Q9C0F3 470 aaPredicted RBP11.01□□□□□ -0.65
PPP1CA-201ENST00000312989 SACSQ9NZJ4 4579 aa11□□□□□ -0.65
PPP1CA-201ENST00000312989 IFNA6P05013 189 aa11□□□□□ -0.65
PPP1CA-201ENST00000312989 CTSDP07339 412 aaPredicted RBP11□□□□□ -0.65
PPP1CA-201ENST00000312989 C8orf88P0DMB2 117 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms