RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 DEFB136Q30KP8 78 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 CXorf66Q5JRM2 361 aaPredicted RBP7.07□□□□□ -1.28
PDE4D-201ENST00000309641 C11orf87Q6NUJ2 197 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 NDUFA11Q86Y39 141 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 OR4A16Q8NH70 328 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 RNASE11Q8TAA1 199 aaKnown RBP7.07□□□□□ -1.28
PDE4D-201ENST00000309641 MYOZ3Q8TDC0 251 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 RRNAD1Q96FB5 475 aaKnown RBP7.07□□□□□ -1.28
PDE4D-201ENST00000309641 TSC22D3Q99576 134 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 NDUFA4L2Q9NRX3 87 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 ZNF355PQ9NSJ1 428 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 COA4Q9NYJ1 87 aa7.07□□□□□ -1.28
PDE4D-201ENST00000309641 TSSC4Q9Y5U2 329 aaPredicted RBP7.07□□□□□ -1.28
PDE4D-201ENST00000309641 MPTX1A8MV57 137 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 ST8SIA3O43173 380 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 RPL23AP62750 156 aaKnown RBP7.06□□□□□ -1.28
PDE4D-201ENST00000309641 C4orf46Q504U0 113 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 NMSQ5H8A3 153 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 MZT2BQ6NZ67 158 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 C8orf86Q6ZUL3 223 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 LYG2Q86SG7 212 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 LGI3Q8N145 548 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 COMMD1Q8N668 190 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 OR1L8Q8NGR8 309 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 FAM110DQ8TAY7 271 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-201ENST00000309641 SEC22CQ9BRL7 303 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 ALX4Q9H161 411 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-201ENST00000309641 CACNG5Q9UF02 275 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 PRNDQ9UKY0 176 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 DMRT1Q9Y5R6 373 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 NBEAL1Q6ZS30 2694 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 A0A0B4J2A0 478 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 ADAP1O75689 374 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 IGHV3-11P01762 117 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 TRGV3P03979 118 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 HOXB5P09067 269 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 H2AFB2P0C5Z0 115 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 TRAPPC2P0DI81 140 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 TRAPPC2BP0DI82 140 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 OR13C7P0DN81 318 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 TPPP2P59282 170 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 TMEM65Q6PI78 240 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 FAM219AQ8IW50 185 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 TTC9CQ8N5M4 171 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 ZNF491Q8N8L2 437 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 KLHL30-AS1Q8NEE0 82 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 OR5M8Q8NGP6 311 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 IL22RA2Q969J5 263 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 FANCD2OSQ96PS1 177 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 SHPKQ9UHJ6 478 aa7.06□□□□□ -1.28
PDE4D-201ENST00000309641 CMYA5Q8N3K9 4069 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 FGF2P09038 288 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 ANXA3P12429 323 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 CTRB1P17538 263 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 PSMB6P28072 239 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 MFAP2P55001 183 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 HSPE1P61604 102 aaKnown RBP7.05□□□□□ -1.28
PDE4D-201ENST00000309641 CTRB2Q6GPI1 263 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 ETV3LQ6ZN32 361 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 DUSP18Q8NEJ0 188 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 OR5B3Q8NH48 314 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 ENKURQ8TC29 256 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 LSM10Q969L4 123 aaKnown RBP7.05□□□□□ -1.28
PDE4D-201ENST00000309641 S4R3C0 116 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 NPIPB5A8MRT5 1133 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 NUDT19A8MXV4 375 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 OR2J3O76001 311 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 ATG12O94817 140 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 DUS4LO95620 317 aaKnown RBP7.05□□□□□ -1.28
PDE4D-201ENST00000309641 CRYGCP07315 174 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 CDX1P47902 265 aaPredicted RBP7.05□□□□□ -1.28
PDE4D-201ENST00000309641 ZNF429Q86V71 674 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 LRTM2Q8N967 370 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 TMEM68Q96MH6 324 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 ZFP57Q9NU63 452 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 FKBP11Q9NYL4 201 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 ZNF257Q9Y2Q1 563 aa7.05□□□□□ -1.28
PDE4D-201ENST00000309641 TRBV9A0A0B4J1U6 114 aa7.04□□□□□ -1.28
PDE4D-201ENST00000309641 I3L521 148 aa7.04□□□□□ -1.28
PDE4D-201ENST00000309641 IFNA17P01571 189 aa7.04□□□□□ -1.28
PDE4D-201ENST00000309641 MECP2P51608 486 aaKnown RBP7.04□□□□□ -1.28
PDE4D-201ENST00000309641 SRPXP78539 464 aa7.04□□□□□ -1.28
PDE4D-201ENST00000309641 RHOGP84095 191 aa7.04□□□□□ -1.28
PDE4D-201ENST00000309641 PRCDQ00LT1 54 aa7.04□□□□□ -1.28
PDE4D-201ENST00000309641 C2orf68Q2NKX9 166 aa7.04□□□□□ -1.28
PDE4D-201ENST00000309641 GGNBP1Q5YKI7 109 aa7.04□□□□□ -1.28
PDE4D-201ENST00000309641 RAX2Q96IS3 184 aa7.04□□□□□ -1.28
PDE4D-201ENST00000309641 UBE2E2Q96LR5 201 aa7.04□□□□□ -1.28
PDE4D-201ENST00000309641 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.04□□□□□ -1.28
PDE4D-201ENST00000309641 NOTCH1P46531 2555 aa7.04□□□□□ -1.28
PDE4D-201ENST00000309641 M0QZ24 198 aa7.03□□□□□ -1.28
PDE4D-201ENST00000309641 CCSO14618 274 aa7.03□□□□□ -1.28
PDE4D-201ENST00000309641 NDUFB8O95169 186 aa7.03□□□□□ -1.28
PDE4D-201ENST00000309641 TRBV12-3P01733 135 aa7.03□□□□□ -1.28
PDE4D-201ENST00000309641 IGHV3-23P01764 117 aa7.03□□□□□ -1.28
PDE4D-201ENST00000309641 SULT1A3P0DMM9 295 aa7.03□□□□□ -1.28
PDE4D-201ENST00000309641 SULT1A4P0DMN0 295 aa7.03□□□□□ -1.28
PDE4D-201ENST00000309641 DEFA1P59665 94 aa7.03□□□□□ -1.28
PDE4D-201ENST00000309641 DEFA3P59666 94 aa7.03□□□□□ -1.28
PDE4D-201ENST00000309641 AARDQ4LEZ3 155 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms