RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CLDND2Q8NHS1 167 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 RPEQ96AT9 228 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 GGACTQ9BVM4 153 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 ENY2Q9NPA8 101 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 SIRT7Q9NRC8 400 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 FBXO7Q9Y3I1 522 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 INSIG2Q9Y5U4 225 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 KPTNQ9Y664 436 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 INS-IGF2F8WCM5 200 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 TSPAN15O95858 294 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 NPY1RP25929 384 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 SNCAP37840 140 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 RAB11AP62491 216 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 DLK1P80370 383 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 BSXQ3C1V8 233 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 VMA21Q3ZAQ7 101 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 LDLRAD2Q5SZI1 272 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 TPTE2P1Q5T6R2 138 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 ETV3LQ6ZN32 361 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 LFNGQ8NES3 379 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 MDFIQ99750 246 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 FOXC2Q99958 501 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 PLEKHA3Q9HB20 300 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 WDR83OSQ9Y284 106 aa9.57□□□□□ -0.88
TRIM40-205ENST00000307859 IGHV3-72A0A0B4J1Y9 119 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 IGHV2-70DA0A0C4DH43 119 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 TMEM218A2RU14 115 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 CD5P06127 495 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 CRYGBP07316 175 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 FGF7P21781 194 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 HTR1DP28221 377 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 ATP5IP56385 69 aaPredicted RBP9.56□□□□□ -0.88
TRIM40-205ENST00000307859 SRSF3P84103 164 aaKnown RBP9.56□□□□□ -0.88
TRIM40-205ENST00000307859 KLRD1Q13241 179 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 MRGPRG-AS1Q2M3A8 158 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 TUSC1Q2TAM9 212 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 SPSB3Q6PJ21 355 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 TEX45Q8NA69 505 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 OR1L8Q8NGR8 309 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 SCRT1Q9BWW7 348 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 SIRPDQ9H106 197 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 NDUFA4L2Q9NRX3 87 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 DPM3Q9P2X0 92 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 BTBD17A6NE02 478 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 SLC25A17O43808 307 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 CA2P00918 260 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 CD1BP29016 333 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 HABP2Q14520 560 aaPredicted RBP9.56□□□□□ -0.88
TRIM40-205ENST00000307859 VMO1Q7Z5L0 202 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 MOB3BQ86TA1 216 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 RITA1Q96K30 269 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 RNF5Q99942 180 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 HINT2Q9BX68 163 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 NPCDR1Q9BY65 106 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 COMMD5Q9GZQ3 224 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 GSX1Q9H4S2 264 aaPredicted RBP9.56□□□□□ -0.88
TRIM40-205ENST00000307859 ZNF430Q9H8G1 570 aaPredicted RBP9.56□□□□□ -0.88
TRIM40-205ENST00000307859 RPRMQ9NS64 109 aa9.56□□□□□ -0.88
TRIM40-205ENST00000307859 TACC2O95359 2948 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 TRAV1-1A0A0B4J248 108 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 A0A1B0GW64 132 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 CGB1A6NKQ9 187 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 FNDC10F2Z333 226 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 NDUFS8O00217 210 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 AGPAT2O15120 278 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 MPDU1O75352 247 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 OPN1MWP04001 364 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 OPN1MW2P0DN77 364 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 OPN1MW3P0DN78 364 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 CEACAM3P40198 252 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 DVL1P1P54792 670 aaPredicted RBP9.55□□□□□ -0.88
TRIM40-205ENST00000307859 LCN2P80188 198 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 AKR1C1Q04828 323 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 C2orf83Q53S99 150 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 TMEM41BQ5BJD5 291 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 NARS2Q96I59 477 aaKnown RBP9.55□□□□□ -0.88
TRIM40-205ENST00000307859 VSIRQ9H7M9 311 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 TPSG1Q9NRR2 321 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 POLR3KQ9Y2Y1 108 aaPredicted RBP9.55□□□□□ -0.88
TRIM40-205ENST00000307859 FAM96BQ9Y3D0 163 aa9.55□□□□□ -0.88
TRIM40-205ENST00000307859 A0A1W2PN81 502 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 VWC2LB2RUY7 222 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 FAM157AC9JC47 383 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 RNASEK-C17orf49H0YIS7 233 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 FOXH1O75593 365 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 HBE1P02100 147 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 IFNA4P05014 189 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 H2AFB1P0C5Y9 115 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 RNASE2P10153 161 aaKnown RBP9.54□□□□□ -0.88
TRIM40-205ENST00000307859 ADCYAP1P18509 176 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 CHRNA7P36544 502 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 PSG5Q15238 335 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 C10orf91Q5T1B1 145 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 MMD2Q8IY49 270 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 C10orf105Q8TEF2 133 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 CFHR4Q92496 578 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 PIMREGQ9BSJ6 248 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 TMEM231Q9H6L2 316 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 TREM1Q9NP99 234 aa9.54□□□□□ -0.88
TRIM40-205ENST00000307859 CSPG4Q6UVK1 2322 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms