RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 COL8A1P27658 744 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 PRSS8Q16651 343 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 C19orf35Q6ZS72 473 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 FLYWCH2Q96CP2 140 aaKnown RBP11.27□□□□□ -0.61
SEC23A-201ENST00000307712 AMMECR1Q9Y4X0 333 aaPredicted RBP11.27□□□□□ -0.61
SEC23A-201ENST00000307712 IGHV3-21A0A0B4J1V1 117 aa11.26□□□□□ -0.61
SEC23A-201ENST00000307712 C8orf88P0DMB2 117 aa11.26□□□□□ -0.61
SEC23A-201ENST00000307712 ZNRF1Q8ND25 227 aa11.26□□□□□ -0.61
SEC23A-201ENST00000307712 HEATR1Q9H583 2144 aaKnown RBP11.26□□□□□ -0.61
SEC23A-201ENST00000307712 CA1P00915 261 aaPredicted RBP11.26□□□□□ -0.61
SEC23A-201ENST00000307712 ACSF3Q4G176 576 aaPredicted RBP11.26□□□□□ -0.61
SEC23A-201ENST00000307712 MAP1LC3CQ9BXW4 147 aa11.26□□□□□ -0.61
SEC23A-201ENST00000307712 ARRDC1-AS1Q9H2J1 176 aa11.26□□□□□ -0.61
SEC23A-201ENST00000307712 GPR6P46095 362 aaPredicted RBP11.26□□□□□ -0.61
SEC23A-201ENST00000307712 SPATA31B1PQ5VZV4 182 aa11.26□□□□□ -0.61
SEC23A-201ENST00000307712 TREML4Q6UXN2 200 aa11.26□□□□□ -0.61
SEC23A-201ENST00000307712 ZNF703Q9H7S9 590 aaPredicted RBP11.26□□□□□ -0.61
SEC23A-201ENST00000307712 LPAR2Q9HBW0 351 aa11.26□□□□□ -0.61
SEC23A-201ENST00000307712 SCGB2A2Q13296 93 aa11.25□□□□□ -0.61
SEC23A-201ENST00000307712 FAM53AQ6NSI3 398 aaPredicted RBP11.25□□□□□ -0.61
SEC23A-201ENST00000307712 PPIAL4AQ9Y536 164 aa11.25□□□□□ -0.61
SEC23A-201ENST00000307712 CDKN1AP38936 164 aa11.25□□□□□ -0.61
SEC23A-201ENST00000307712 KLF3P57682 345 aaPredicted RBP11.25□□□□□ -0.61
SEC23A-201ENST00000307712 KRTCAP3Q53RY4 240 aa11.25□□□□□ -0.61
SEC23A-201ENST00000307712 CHD3Q12873 2000 aaKnown RBP11.25□□□□□ -0.61
SEC23A-201ENST00000307712 INTS1Q8N201 2190 aaKnown RBP11.25□□□□□ -0.61
SEC23A-201ENST00000307712 H3BTX0 84 aa11.25□□□□□ -0.61
SEC23A-201ENST00000307712 LEPROTL1O95214 131 aa11.25□□□□□ -0.61
SEC23A-201ENST00000307712 KCNS1Q96KK3 526 aa11.25□□□□□ -0.61
SEC23A-201ENST00000307712 DIRC2Q96SL1 478 aa11.25□□□□□ -0.61
SEC23A-201ENST00000307712 CALYQ9NYX4 217 aa11.25□□□□□ -0.61
SEC23A-201ENST00000307712 TMPRSS2O15393 492 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 STAG3L2P0CL84 134 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 STAG3L3P0CL85 134 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 FCER1GP30273 86 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 EFNB3Q15768 340 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 PRR31Q5SQ13 230 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 PMS2CLQ68D20 193 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 LCN12Q6JVE5 192 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 ACP7Q6ZNF0 438 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 GGTLC1Q9BX51 225 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 TMEM11P17152 192 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 TNFAIP6P98066 277 aaPredicted RBP11.24□□□□□ -0.61
SEC23A-201ENST00000307712 ZNF114Q8NC26 417 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 FAM122AQ96E09 287 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 SEPSECSQ9HD40 501 aaKnown RBP11.24□□□□□ -0.61
SEC23A-201ENST00000307712 THADAQ6YHU6 1953 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 PGPA6NDG6 321 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 ZNF324O75467 553 aaPredicted RBP11.24□□□□□ -0.61
SEC23A-201ENST00000307712 LHX2P50458 406 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 OR8B3Q8NGG8 313 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 OR1L8Q8NGR8 309 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 RBP4P02753 201 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 B3GALT5-AS1P59052 145 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
SEC23A-201ENST00000307712 RBFOX2O43251 390 aaKnown RBP eCLIP11.23□□□□□ -0.611e-6■■■□□ 16.9
SEC23A-201ENST00000307712 FOXF2Q12947 444 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 UNQ5815/PRO19632Q6UWF5 114 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 TRAV9-1A0A075B6T8 112 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 hADV38S2A0JD32 116 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 A8MWL6 223 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 UQCRFS1P47985 274 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 CLDN18P56856 261 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 LYZP61626 148 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 Q6P435 159 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 SLC25A34Q6PIV7 304 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 SSBP4Q9BWG4 385 aaPredicted RBP11.23□□□□□ -0.61
SEC23A-201ENST00000307712 JPT1Q9UK76 154 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 NUDT3O95989 172 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 BTF3P20290 206 aaKnown RBP11.23□□□□□ -0.61
SEC23A-201ENST00000307712 PLA2G5P39877 138 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 CCL13Q99616 98 aa11.23□□□□□ -0.61
SEC23A-201ENST00000307712 TRBV6-6A0A0A6YYG2 114 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 LINC00473A8K010 186 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 C15orf62A8K5M9 175 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 BPIFA4PQ86YQ2 179 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 RELBQ01201 579 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 Q6ZWC4 215 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 FAM214BQ7L5A3 538 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 WFDC8Q8IUA0 241 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 OR8A1Q8NGG7 326 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 PROK2Q9HC23 129 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 YTHDF2Q9Y5A9 579 aaKnown RBP11.22□□□□□ -0.61
SEC23A-201ENST00000307712 SPTAN1Q13813 2472 aaKnown RBP11.22□□□□□ -0.61
SEC23A-201ENST00000307712 PCNX1Q96RV3 2341 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 K7ERU9 68 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 FOXH1O75593 365 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 TYMSP04818 313 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 FAM201AQ5SY85 155 aa11.22□□□□□ -0.61
SEC23A-201ENST00000307712 C1orf174Q8IYL3 243 aa11.21□□□□□ -0.61
SEC23A-201ENST00000307712 MGST2Q99735 147 aa11.21□□□□□ -0.61
SEC23A-201ENST00000307712 ZFP30Q9Y2G7 519 aa11.21□□□□□ -0.61
SEC23A-201ENST00000307712 DUTP33316 252 aaKnown RBP11.21□□□□□ -0.61
SEC23A-201ENST00000307712 RPL24P83731 157 aaKnown RBP11.21□□□□□ -0.61
SEC23A-201ENST00000307712 CRIP3Q6Q6R5 217 aa11.21□□□□□ -0.61
SEC23A-201ENST00000307712 COLCA1Q6ZS62 124 aa11.21□□□□□ -0.61
SEC23A-201ENST00000307712 ALKBH7Q9BT30 221 aaPredicted RBP11.21□□□□□ -0.61
SEC23A-201ENST00000307712 TMEM70Q9BUB7 260 aa11.21□□□□□ -0.61
SEC23A-201ENST00000307712 GNB1LQ9BYB4 327 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms