RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 PAX1P15863 534 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 ZNF137PP52743 207 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 FOXA3P55318 350 aaPredicted RBP10.89□□□□□ -0.67
TRIM35-201ENST00000305364 ALKBH6Q3KRA9 238 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 PRR31Q5SQ13 230 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 VHLLQ6RSH7 139 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 FAM173AQ9BQD7 235 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 TMEM140Q9NV12 185 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 OR9G9P0C7N8 305 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 LINC00869P0C866 280 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 IGFBP2P18065 325 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 GFRA1P56159 465 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 Q0VG73 95 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 EFNB3Q15768 340 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 SSX8Q7RTT4 187 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 GGNQ86UU5 652 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 OR4S2Q8NH73 311 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 IMMP1LQ96LU5 166 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 SGK494Q96LW2 274 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 NABP2Q9BQ15 211 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 DCTN5Q9BTE1 182 aa10.89□□□□□ -0.67
TRIM35-201ENST00000305364 A0A1W2PS18 150 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 CCL25O15444 150 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 FOXH1O75593 365 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 GATA2P23769 480 aaPredicted RBP10.88□□□□□ -0.67
TRIM35-201ENST00000305364 PI4KAP42356 2102 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 SELENOTP62341 195 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 OR10J3Q5JRS4 329 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 MRPL14Q6P1L8 145 aaKnown RBP10.88□□□□□ -0.67
TRIM35-201ENST00000305364 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 TRAV9-2A0A087WT02 112 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 TRBV6-6A0A0A6YYG2 114 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 C15orf62A8K5M9 175 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 CA2P00918 260 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 SLC25A34Q6PIV7 304 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 DEFB108BQ8NET1 73 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 LRRC29Q8WV35 223 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 NGBQ9NPG2 151 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 COX11Q9Y6N1 276 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 M0R296 226 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 SARAFQ96BY9 339 aa10.88□□□□□ -0.67
TRIM35-201ENST00000305364 CHD7Q9P2D1 2997 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 OR4C46A6NHA9 309 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 CENPVQ7Z7K6 275 aaPredicted RBP10.87□□□□□ -0.67
TRIM35-201ENST00000305364 RAB1CQ92928 201 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 MGST2Q99735 147 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 SSBP4Q9BWG4 385 aaPredicted RBP10.87□□□□□ -0.67
TRIM35-201ENST00000305364 COMMD5Q9GZQ3 224 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 RAB9BQ9NP90 201 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 CACNA1AO00555 2505 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 PIEZO1Q92508 2521 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 PATE3B3GLJ2 98 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 SLC25A5P05141 298 aaKnown RBP10.87□□□□□ -0.67
TRIM35-201ENST00000305364 ADH4P08319 380 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 ZNF83P51522 516 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 OR8B3Q8NGG8 313 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 LOXL4Q96JB6 756 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 TMEM70Q9BUB7 260 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 FGF23Q9GZV9 251 aaPredicted RBP10.87□□□□□ -0.67
TRIM35-201ENST00000305364 TRBV20OR9-2A0A075B6H5 130 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 NKX6-3A6NJ46 265 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 LEPROTL1O95214 131 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 RNPS1Q15287 305 aaKnown RBP10.87□□□□□ -0.67
TRIM35-201ENST00000305364 RPL39P5Q59GN2 51 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 C12orf54Q6X4T0 127 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 TMEM251Q8N6I4 163 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 CDC42EP3Q9UKI2 254 aa10.87□□□□□ -0.67
TRIM35-201ENST00000305364 PSPNO60542 156 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 CELA3AP09093 270 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 FRMD6-AS1P0C7T7 363 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 RPL8P62917 257 aaKnown RBP10.86□□□□□ -0.67
TRIM35-201ENST00000305364 RCHY1Q96PM5 261 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 CLEC7AQ9BXN2 247 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 ZNF835Q9Y2P0 537 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 XIRP2A4UGR9 3374 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 GTF3C1Q12789 2109 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 TCTAP57738 103 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 MAJINQ3KP22 176 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 Q6P435 159 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 OR13A1Q8NGR1 328 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 DYNLRB1Q9NP97 96 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 CLEC5AQ9NY25 188 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 LINC00473A8K010 186 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.86□□□□□ -0.67
TRIM35-201ENST00000305364 J3QR06 171 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 ISLRO14498 428 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 CEACAM8P31997 349 aaPredicted RBP10.86□□□□□ -0.67
TRIM35-201ENST00000305364 CX3CL1P78423 397 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 NIT1Q86X76 327 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 LEAP2Q969E1 77 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 MAP1LC3CQ9BXW4 147 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 SSUH2Q9Y2M2 353 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 SELENOKQ9Y6D0 94 aa10.86□□□□□ -0.67
TRIM35-201ENST00000305364 UQCRFS1P47985 274 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 DEFB109BQ30KR1 87 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 OR2Z1Q8NG97 314 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 BCL2L2Q92843 193 aaPredicted RBP10.85□□□□□ -0.67
TRIM35-201ENST00000305364 TRGV10A0A0A0MS01 117 aa10.85□□□□□ -0.67
TRIM35-201ENST00000305364 ERHP84090 104 aaKnown RBP10.85□□□□□ -0.67
TRIM35-201ENST00000305364 SSPNQ14714 243 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms