RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 RPL31P62899 125 aaKnown RBP11.75□□□□□ -0.53
SDC2-201ENST00000302190 FOXF2Q12947 444 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 SLC24A4Q8NFF2 622 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 TMEM45BQ96B21 275 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 TFPI2P48307 235 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 RANP62826 216 aaKnown RBP11.75□□□□□ -0.53
SDC2-201ENST00000302190 RNFT1Q5M7Z0 435 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 CYP2G1PQ6ZSU1 146 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 ANAPC16Q96DE5 110 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 KMT2EQ8IZD2 1858 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 REG1AP05451 166 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 TAS2R45P59539 299 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 RNASEKQ6P5S7 137 aaKnown RBP11.75□□□□□ -0.53
SDC2-201ENST00000302190 PQLC2Q6ZP29 291 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 SSC4DQ8WTU2 575 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 HARBI1Q96MB7 349 aa11.75□□□□□ -0.53
SDC2-201ENST00000302190 ADGRG4Q8IZF6 3080 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 CYC1P08574 325 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 COX7A1P24310 79 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 GAGE1Q13065 139 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 ZNF585BQ52M93 769 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 PSMG3Q9BT73 122 aaPredicted RBP11.74□□□□□ -0.53
SDC2-201ENST00000302190 MS4A5Q9H3V2 200 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 NKX6-3A6NJ46 265 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 CSN3P07498 182 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 TCTAP57738 103 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 FAM90A2PQ658T7 463 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 HCP5Q6MZN7 132 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 ZNF497Q6ZNH5 498 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 P2RX4Q99571 388 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 NPVFQ9HCQ7 196 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 OR6C3Q9NZP0 311 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 NAGKQ9UJ70 344 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 CGAP01215 116 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 IGLV3-1P01715 115 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 HES4Q9HCC6 221 aa11.74□□□□□ -0.53
SDC2-201ENST00000302190 TRAV3A0A0B4J244 114 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 HPRT1P00492 218 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 TEX38Q6PEX7 206 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 ACP7Q6ZNF0 438 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 FOXL2NBQ6ZUU3 175 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 LOXL4Q96JB6 756 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 LINC00473A8K010 186 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 ADH4P08319 380 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 CRIP3Q6Q6R5 217 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 MOB3BQ86TA1 216 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 SPSB4Q96A44 273 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 CALYQ9NYX4 217 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 PDE6DO43924 150 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 IGKV1D-33P01593 117 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 IGKV1-33P01594 117 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 OR9G9P0C7N8 305 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 ZNF726P1Q15940 193 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 LEMD1Q68G75 181 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 Q6ZPA2 131 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 MRPS18CQ9Y3D5 142 aaKnown RBP11.73□□□□□ -0.53
SDC2-201ENST00000302190 OR51B2Q9Y5P1 312 aa11.73□□□□□ -0.53
SDC2-201ENST00000302190 CXorf1O96002 111 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 CHRNB4P30926 498 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 MAS1LP35410 378 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 ZNF137PP52743 207 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 COL5A1-AS1Q5SY13 56 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 C9orf106Q8NAJ2 232 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 ZBTB34Q8NCN2 500 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 TECRQ9NZ01 308 aaKnown RBP11.72□□□□□ -0.53
SDC2-201ENST00000302190 ANKHD1Q8IWZ3 2542 aaKnown RBP11.72□□□□□ -0.53
SDC2-201ENST00000302190 MGST3O14880 152 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 IGFBP2P18065 325 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 RPEL1Q2QD12 228 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 ASCL4Q6XD76 172 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 OR1B1Q8NGR6 318 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 RNASE8Q8TDE3 154 aaKnown RBP11.72□□□□□ -0.53
SDC2-201ENST00000302190 LPAR2Q9HBW0 351 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 ARL2-SNX15V9GYD0 113 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 RAB29O14966 203 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 SLC25A5P05141 298 aaKnown RBP11.72□□□□□ -0.53
SDC2-201ENST00000302190 SMIM15Q7Z3B0 74 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 STPG3Q8N7X2 389 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 OR5AU1Q8NGC0 362 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 OR2D3Q8NGH3 330 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 CORO2AQ92828 525 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 SLC45A2Q9UMX9 530 aa11.72□□□□□ -0.53
SDC2-201ENST00000302190 TMEM210A6NLX4 147 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 IFNL4K9M1U5 179 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 TNFSF10P50591 281 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 ASPHD1Q5U4P2 390 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 CLEC2AQ6UVW9 174 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 GAL3ST2Q9H3Q3 398 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 RALYQ9UKM9 306 aaKnown RBP11.71□□□□□ -0.53
SDC2-201ENST00000302190 RNF115Q9Y4L5 304 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 MFAP2P55001 183 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 TMEM183BQ1AE95 376 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 WDR82Q6UXN9 313 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 TMEM256Q8N2U0 113 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 ZNRD1Q9P1U0 126 aa11.71□□□□□ -0.53
SDC2-201ENST00000302190 CHD3Q12873 2000 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms