RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 GDF5OSQ5U4N7 250 aa11.99□□□□□ -0.49
CDT1-201ENST00000301019 MIR17HGQ75NE6 70 aa11.99□□□□□ -0.49
CDT1-201ENST00000301019 MOB3BQ86TA1 216 aa11.99□□□□□ -0.49
CDT1-201ENST00000301019 TIGITQ495A1 244 aa11.99□□□□□ -0.49
CDT1-201ENST00000301019 PLEKHA3Q9HB20 300 aa11.99□□□□□ -0.49
CDT1-201ENST00000301019 TRAV24A0A0B4J272 114 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 PPIAL4CA0A0B4J2A2 164 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 LRRC30A6NM36 301 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 PPIAL4GP0DN37 164 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 GCHFRP30047 84 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 CX3CL1P78423 397 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 VWA1Q6PCB0 445 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 C19orf35Q6ZS72 473 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 TMEM251Q8N6I4 163 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 OR5B3Q8NH48 314 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 AKIRIN1Q9H9L7 192 aaPredicted RBP11.98□□□□□ -0.49
CDT1-201ENST00000301019 CSMD1Q96PZ7 3565 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 TRAV26-1A0A087WT03 109 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 SYNGR3O43761 229 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 SRD5A2P31213 254 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 RHBDD2Q6NTF9 364 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 YRDCQ86U90 279 aaKnown RBP11.98□□□□□ -0.49
CDT1-201ENST00000301019 NINJ1Q92982 152 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 LIN7CQ9NUP9 197 aaKnown RBP11.98□□□□□ -0.49
CDT1-201ENST00000301019 PEF1Q9UBV8 284 aaKnown RBP11.98□□□□□ -0.49
CDT1-201ENST00000301019 hCG_38984A0A1B0GV85 526 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 C2orf70A6NJV1 201 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 IGHV3-48P01763 117 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 AMY1AP04745 511 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 LINC00869P0C866 280 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 MYOD1P15172 320 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 HTR1DP28221 377 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 TMEM164Q5U3C3 297 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 FAM71F2Q6NXP2 309 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 PNKDQ8N490 385 aa11.98□□□□□ -0.49
CDT1-201ENST00000301019 MRPS17Q9Y2R5 130 aaKnown RBP11.98□□□□□ -0.49
CDT1-201ENST00000301019 TEX48A0A1B0GUV7 120 aa11.97□□□□□ -0.49
CDT1-201ENST00000301019 CHEK1O14757 476 aa11.97□□□□□ -0.49
CDT1-201ENST00000301019 IFI6P09912 130 aa11.97□□□□□ -0.49
CDT1-201ENST00000301019 OR10J3Q5JRS4 329 aa11.97□□□□□ -0.49
CDT1-201ENST00000301019 SRSF8Q9BRL6 282 aaKnown RBP11.97□□□□□ -0.49
CDT1-201ENST00000301019 RAB9AP51151 201 aa11.97□□□□□ -0.49
CDT1-201ENST00000301019 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.97□□□□□ -0.49
CDT1-201ENST00000301019 BLACEA4D250 179 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 G3V4G9 280 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 CEACAM21Q3KPI0 293 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 ASCL4Q6XD76 172 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 TCF24Q7RTU0 167 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 MRPL21Q7Z2W9 205 aaKnown RBP11.96□□□□□ -0.49
CDT1-201ENST00000301019 HSD17B10Q99714 261 aaKnown RBP11.96□□□□□ -0.49
CDT1-201ENST00000301019 MGST2Q99735 147 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.96□□□□□ -0.49
CDT1-201ENST00000301019 PMS2P5A8MQ11 134 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 CRYGSP22914 178 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 GPR183P32249 361 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 SRYQ05066 204 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 SRXN1Q9BYN0 137 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 DLL3Q9NYJ7 618 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 TIMM9Q9Y5J7 89 aa11.96□□□□□ -0.49
CDT1-201ENST00000301019 LEPROTL1O95214 131 aa11.96□□□□□ -0.5
CDT1-201ENST00000301019 FOXG1P55316 489 aaPredicted RBP11.96□□□□□ -0.5
CDT1-201ENST00000301019 RBPJQ06330 500 aa11.96□□□□□ -0.5
CDT1-201ENST00000301019 TREML4Q6UXN2 200 aa11.96□□□□□ -0.5
CDT1-201ENST00000301019 LSM10Q969L4 123 aaKnown RBP11.96□□□□□ -0.5
CDT1-201ENST00000301019 SF3B5Q9BWJ5 86 aaKnown RBP11.96□□□□□ -0.5
CDT1-201ENST00000301019 CXorf1O96002 111 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 FGF12P61328 243 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 C12orf54Q6X4T0 127 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 WFDC3Q8IUB2 231 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 SPEM1Q8N4L4 309 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 OR4S2Q8NH73 311 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 MAFAQ8NHW3 353 aaPredicted RBP11.95□□□□□ -0.5
CDT1-201ENST00000301019 ASCL2Q99929 193 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 C15orf62A8K5M9 175 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 H3BTX0 84 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 PLAUP00749 431 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 WDR73Q6P4I2 378 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 FGF21Q9NSA1 209 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 TSSC4Q9Y5U2 329 aaPredicted RBP11.95□□□□□ -0.5
CDT1-201ENST00000301019 CEP250Q9BV73 2442 aa11.95□□□□□ -0.5
CDT1-201ENST00000301019 TRAV3A0A0B4J244 114 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 A0A0J9YW62 118 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 NDUFS8O00217 210 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 Q6ZR03 302 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 Q8N7P7 452 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 ZNF441Q8N8Z8 693 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 STXBP6Q8NFX7 210 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 TANC2Q9HCD6 1990 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 BOD1L1Q8NFC6 3051 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.94□□□□□ -0.5
CDT1-201ENST00000301019 IGLV3-19P01714 112 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 HIST1H1EP10412 219 aaKnown RBP11.94□□□□□ -0.5
CDT1-201ENST00000301019 PTGDSP41222 190 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 ARF6P62330 175 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 EFNB3Q15768 340 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 SRSF7Q16629 238 aaKnown RBP eCLIP11.94□□□□□ -0.5
CDT1-201ENST00000301019 GTF2H5Q6ZYL4 71 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 PLXNB1O43157 2135 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 SPTY2D1-AS1A0A0U1RR47 76 aa11.94□□□□□ -0.5
CDT1-201ENST00000301019 ISLRO14498 428 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms