RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 IGHV3-7P01780 117 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 TMPRSS3P57727 454 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 C1orf185Q5T7R7 199 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 C1QL3Q5VWW1 255 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 PLPPR1Q8TBJ4 325 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 PSG4Q00888 419 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 GCSAMLQ5JQS6 135 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 CT83Q5H943 113 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 CXorf66Q5JRM2 361 aaPredicted RBP9.65□□□□□ -0.86
GCN1-201ENST00000300648 PGPEP1Q9NXJ5 209 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 SCTP09683 121 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 PATE4P0C8F1 98 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 HSD52Q0P140 79 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 PTPRDP23468 1912 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 HYAL3O43820 417 aaPredicted RBP9.65□□□□□ -0.86
GCN1-201ENST00000300648 APOMO95445 188 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 RNF224P0DH78 156 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 GOLT1AQ6ZVE7 132 aa9.65□□□□□ -0.86
GCN1-201ENST00000300648 TMEM14DPA8MWL7 114 aa9.65□□□□□ -0.87
GCN1-201ENST00000300648 FAM57AQ8TBR7 257 aa9.65□□□□□ -0.87
GCN1-201ENST00000300648 IGLV1-36A0A0B4J1U3 117 aa9.65□□□□□ -0.87
GCN1-201ENST00000300648 TRAV8-6A0A0B4J262 113 aa9.65□□□□□ -0.87
GCN1-201ENST00000300648 ZNF708P17019 499 aa9.65□□□□□ -0.87
GCN1-201ENST00000300648 TRAV8-2A0A0B4J237 113 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 GRIFINA4D1Z8 144 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 ZNF883P0CG24 379 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 CCL3P10147 92 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 LINC00305Q7Z4B0 112 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 KLHDC2Q9Y2U9 406 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 GTF3AQ92664 365 aaKnown RBP9.64□□□□□ -0.87
GCN1-201ENST00000300648 UCP1P25874 307 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 DLL3Q9NYJ7 618 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 IFITM2Q01629 132 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 RTN4RL2Q86UN3 420 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 TTTY12Q9BZ98 90 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 TNRC6AQ8NDV7 1962 aaKnown RBP9.64□□□□□ -0.87
GCN1-201ENST00000300648 J3KRW8 73 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 FAM60AQ9NP50 221 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 TMEM106BQ9NUM4 274 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 IGHV5-10-1A0A0J9YXX1 117 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 APOHP02749 345 aaPredicted RBP9.64□□□□□ -0.87
GCN1-201ENST00000300648 DTX1Q86Y01 620 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 PHLDA1Q8WV24 401 aaPredicted RBP9.64□□□□□ -0.87
GCN1-201ENST00000300648 R4GN57 208 aa9.64□□□□□ -0.87
GCN1-201ENST00000300648 TRBV7-9A0A0J9YWB2 115 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 NKX2-8O15522 239 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 FXYD3Q14802 87 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 FBLN7Q53RD9 439 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 BEX4Q9NWD9 120 aaPredicted RBP9.63□□□□□ -0.87
GCN1-201ENST00000300648 DPM2O94777 84 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 UCN2Q96RP3 112 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 HBDP02042 147 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 ERVK11-1P61568 191 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 UNQ5815/PRO19632Q6UWF5 114 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 RTN4RQ9BZR6 473 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 LHFPL6Q9Y693 200 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 NYNRINQ9P2P1 1898 aaKnown RBP9.63□□□□□ -0.87
GCN1-201ENST00000300648 A0A1B0GW64 132 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 A8MWV9 139 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 NBEAP1P0C6P0 100 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 HOXB3P14651 431 aaPredicted RBP9.63□□□□□ -0.87
GCN1-201ENST00000300648 GDF15Q99988 308 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 F2Z2F3 143 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 SRP19P09132 144 aaKnown RBP9.63□□□□□ -0.87
GCN1-201ENST00000300648 MPZP25189 248 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 IL11P20809 199 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 ZFP36L2P47974 494 aaKnown RBP9.63□□□□□ -0.87
GCN1-201ENST00000300648 OSTCQ9NRP0 149 aa9.63□□□□□ -0.87
GCN1-201ENST00000300648 TMEM238C9JI98 176 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 IFI27P40305 119 aaPredicted RBP9.62□□□□□ -0.87
GCN1-201ENST00000300648 GFRA1P56159 465 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.62□□□□□ -0.87
GCN1-201ENST00000300648 ZNF818PQ6ZRF7 136 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 SLC50A1Q9BRV3 221 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 ZSWIM8A7E2V4 1837 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 SRSF1Q07955 248 aaKnown RBP eCLIP9.62□□□□□ -0.875e-7■□□□□ 10.3
GCN1-201ENST00000300648 ATXN8Q156A1 80 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 FGF11Q92914 225 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 TRAV8-4A0A0B4J246 113 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 ADAMTSL1Q8N6G6 1762 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 ZG16O60844 167 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 CCL20P78556 96 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 RHOGP84095 191 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 RPRMQ9NS64 109 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 TMEM74BQ9NUR3 256 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 OR11H4Q8NGC9 324 aa9.62□□□□□ -0.87
GCN1-201ENST00000300648 TSC2P49815 1807 aa9.61□□□□□ -0.87
GCN1-201ENST00000300648 IGHV3OR15-7A0A075B7D8 119 aa9.61□□□□□ -0.87
GCN1-201ENST00000300648 HIGD1CA8MV81 97 aa9.61□□□□□ -0.87
GCN1-201ENST00000300648 FAM166AQ6J272 317 aa9.61□□□□□ -0.87
GCN1-201ENST00000300648 C1orf162Q8NEQ5 155 aaPredicted RBP9.61□□□□□ -0.87
GCN1-201ENST00000300648 OTORQ9NRC9 128 aa9.61□□□□□ -0.87
GCN1-201ENST00000300648 SIRT4Q9Y6E7 314 aaPredicted RBP9.61□□□□□ -0.87
GCN1-201ENST00000300648 TMEM86BQ8N661 226 aa9.61□□□□□ -0.87
GCN1-201ENST00000300648 ARHGAP32A7KAX9 2087 aa9.61□□□□□ -0.87
GCN1-201ENST00000300648 COX11Q9Y6N1 276 aa9.61□□□□□ -0.87
GCN1-201ENST00000300648 GGTLC3B5MD39 225 aa9.61□□□□□ -0.87
GCN1-201ENST00000300648 LGALS1P09382 135 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms