RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 TMEM167AQ8TBQ9 72 aa20.65■□□□□ 0.9
SDCCAG3-201ENST00000298537 A0A1W2PPI3 338 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 F8W036 122 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 CD24P25063 80 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 RAB13P51153 203 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 LMO4P61968 165 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 LCN15Q6UWW0 184 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 EIF5A2Q9GZV4 153 aaKnown RBP20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 A1L4Q6 167 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 HMGB3O15347 200 aaKnown RBP20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 SFTA3P0C7M3 94 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 MC5RP33032 325 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 DVL1P1P54792 670 aaPredicted RBP20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 ARSJQ5FYB0 599 aaPredicted RBP20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 VMO1Q7Z5L0 202 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 CCL19Q99731 98 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 NDUFA4L2Q9NRX3 87 aa20.64■□□□□ 0.89
SDCCAG3-201ENST00000298537 CENPEQ02224 2701 aa20.63■□□□□ 0.89
SDCCAG3-201ENST00000298537 TLE4Q04727 773 aa20.63■□□□□ 0.89
SDCCAG3-201ENST00000298537 MLANAQ16655 118 aa20.63■□□□□ 0.89
SDCCAG3-201ENST00000298537 TREML4Q6UXN2 200 aa20.63■□□□□ 0.89
SDCCAG3-201ENST00000298537 RPP25LQ8N5L8 163 aaKnown RBP20.63■□□□□ 0.89
SDCCAG3-201ENST00000298537 RCC1LQ96I51 464 aaKnown RBP20.63■□□□□ 0.89
SDCCAG3-201ENST00000298537 COMMD5Q9GZQ3 224 aa20.63■□□□□ 0.89
SDCCAG3-201ENST00000298537 LPAR2Q9HBW0 351 aa20.63■□□□□ 0.89
SDCCAG3-201ENST00000298537 PRTN3P24158 256 aa20.62■□□□□ 0.89
SDCCAG3-201ENST00000298537 RPP30P78346 268 aaKnown RBP20.62■□□□□ 0.89
SDCCAG3-201ENST00000298537 PAX2Q02962 417 aa20.62■□□□□ 0.89
SDCCAG3-201ENST00000298537 WDR83OSQ9Y284 106 aa20.62■□□□□ 0.89
SDCCAG3-201ENST00000298537 M0R1W7 72 aa20.62■□□□□ 0.89
SDCCAG3-201ENST00000298537 PPT1P50897 306 aa20.62■□□□□ 0.89
SDCCAG3-201ENST00000298537 GCSAMLQ5JQS6 135 aa20.62■□□□□ 0.89
SDCCAG3-201ENST00000298537 OR11H6Q8NGC7 330 aa20.62■□□□□ 0.89
SDCCAG3-201ENST00000298537 OR5B3Q8NH48 314 aa20.62■□□□□ 0.89
SDCCAG3-201ENST00000298537 TIMM23O14925 209 aa20.61■□□□□ 0.89
SDCCAG3-201ENST00000298537 M6PRP20645 277 aa20.61■□□□□ 0.89
SDCCAG3-201ENST00000298537 USF1P22415 310 aaPredicted RBP20.61■□□□□ 0.89
SDCCAG3-201ENST00000298537 TPTE2P1Q5T6R2 138 aa20.61■□□□□ 0.89
SDCCAG3-201ENST00000298537 CENPVQ7Z7K6 275 aaPredicted RBP20.61■□□□□ 0.89
SDCCAG3-201ENST00000298537 AIFM2Q9BRQ8 373 aa20.61■□□□□ 0.89
SDCCAG3-201ENST00000298537 APELAP0DMC3 54 aa20.61■□□□□ 0.89
SDCCAG3-201ENST00000298537 SERF2P84101 59 aa20.61■□□□□ 0.89
SDCCAG3-201ENST00000298537 HAGHQ16775 308 aa20.61■□□□□ 0.89
SDCCAG3-201ENST00000298537 TMEM41BQ5BJD5 291 aa20.61■□□□□ 0.89
SDCCAG3-201ENST00000298537 DYNAPQ8N1N2 210 aa20.61■□□□□ 0.89
SDCCAG3-201ENST00000298537 RAB11AP62491 216 aa20.6■□□□□ 0.89
SDCCAG3-201ENST00000298537 WT1-ASQ06250 92 aa20.6■□□□□ 0.89
SDCCAG3-201ENST00000298537 ABCA2Q9BZC7 2435 aa20.6■□□□□ 0.89
SDCCAG3-201ENST00000298537 HTR1DP28221 377 aa20.6■□□□□ 0.89
SDCCAG3-201ENST00000298537 BTN1A1Q13410 526 aa20.6■□□□□ 0.89
SDCCAG3-201ENST00000298537 FFAR4Q5NUL3 377 aa20.6■□□□□ 0.89
SDCCAG3-201ENST00000298537 C19orf35Q6ZS72 473 aa20.6■□□□□ 0.89
SDCCAG3-201ENST00000298537 TIMM9Q9Y5J7 89 aa20.6■□□□□ 0.89
SDCCAG3-201ENST00000298537 ODF3BA8MYP8 253 aa20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 REG1AP05451 166 aa20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 RNASE2P10153 161 aaKnown RBP20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 C10orf91Q5T1B1 145 aa20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 MGST2Q99735 147 aa20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 SLC25A22Q9H936 323 aa20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 FKBP11Q9NYL4 201 aa20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 AMMECR1Q9Y4X0 333 aaPredicted RBP20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 PSG5Q15238 335 aa20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 VMA21Q3ZAQ7 101 aa20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 OR1L8Q8NGR8 309 aa20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 VSTM2AQ8TAG5 236 aa20.59■□□□□ 0.89
SDCCAG3-201ENST00000298537 LY86O95711 162 aa20.58■□□□□ 0.89
SDCCAG3-201ENST00000298537 FBP1P09467 338 aa20.58■□□□□ 0.89
SDCCAG3-201ENST00000298537 HOXB4P17483 251 aaPredicted RBP20.58■□□□□ 0.89
SDCCAG3-201ENST00000298537 DPM3Q9P2X0 92 aa20.58■□□□□ 0.89
SDCCAG3-201ENST00000298537 NUPL2O15504 423 aaKnown RBP20.58■□□□□ 0.88
SDCCAG3-201ENST00000298537 CRYGBP07316 175 aa20.58■□□□□ 0.88
SDCCAG3-201ENST00000298537 SIRPDQ9H106 197 aa20.58■□□□□ 0.88
SDCCAG3-201ENST00000298537 FBXL15Q9H469 300 aa20.58■□□□□ 0.88
SDCCAG3-201ENST00000298537 KLF2Q9Y5W3 355 aaPredicted RBP20.58■□□□□ 0.88
SDCCAG3-201ENST00000298537 POLQO75417 2590 aa20.57■□□□□ 0.88
SDCCAG3-201ENST00000298537 LGALS7P47929 136 aa20.57■□□□□ 0.88
SDCCAG3-201ENST00000298537 DLK1P80370 383 aa20.57■□□□□ 0.88
SDCCAG3-201ENST00000298537 DPPA3Q6W0C5 159 aa20.57■□□□□ 0.88
SDCCAG3-201ENST00000298537 COMMD1Q8N668 190 aa20.57■□□□□ 0.88
SDCCAG3-201ENST00000298537 SPOCK3Q9BQ16 436 aa20.57■□□□□ 0.88
SDCCAG3-201ENST00000298537 SSX2Q16385 188 aa20.56■□□□□ 0.88
SDCCAG3-201ENST00000298537 BSXQ3C1V8 233 aa20.56■□□□□ 0.88
SDCCAG3-201ENST00000298537 OR4A5Q8NH83 315 aa20.56■□□□□ 0.88
SDCCAG3-201ENST00000298537 SSMEM1Q8WWF3 244 aa20.56■□□□□ 0.88
SDCCAG3-201ENST00000298537 IGHV2-70DA0A0C4DH43 119 aa20.56■□□□□ 0.88
SDCCAG3-201ENST00000298537 FCN1O00602 326 aa20.56■□□□□ 0.88
SDCCAG3-201ENST00000298537 MIC13Q5XKP0 118 aa20.56■□□□□ 0.88
SDCCAG3-201ENST00000298537 ZNF787Q6DD87 383 aa20.56■□□□□ 0.88
SDCCAG3-201ENST00000298537 CFHR4Q92496 578 aa20.56■□□□□ 0.88
SDCCAG3-201ENST00000298537 CARHSP1Q9Y2V2 147 aaKnown RBP20.56■□□□□ 0.88
SDCCAG3-201ENST00000298537 SIGLEC9Q9Y336 463 aa20.56■□□□□ 0.88
SDCCAG3-201ENST00000298537 RBFOX3A6NFN3 312 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 VENTXO95231 258 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 PRSS8Q16651 343 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 ZNF709Q8N972 641 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 OR10G4Q8NGN3 311 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 OR10G9Q8NGN4 311 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 OR10G7Q8NGN6 311 aa20.55■□□□□ 0.88
SDCCAG3-201ENST00000298537 SEC11CQ9BY50 192 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms