RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TGIF2LXQ8IUE1 241 aa7.64□□□□□ -1.19
PRDM9-201ENST00000296682 LOC102723971A0A1B0GUV8 181 aa7.64□□□□□ -1.19
PRDM9-201ENST00000296682 CR1LQ2VPA4 569 aa7.64□□□□□ -1.19
PRDM9-201ENST00000296682 Q8TCH9 128 aa7.64□□□□□ -1.19
PRDM9-201ENST00000296682 YPEL4Q96NS1 127 aa7.64□□□□□ -1.19
PRDM9-201ENST00000296682 TUBA4BQ9H853 241 aa7.64□□□□□ -1.19
PRDM9-201ENST00000296682 NIT2Q9NQR4 276 aa7.64□□□□□ -1.19
PRDM9-201ENST00000296682 PKD1L2Q7Z442 2459 aa7.64□□□□□ -1.19
PRDM9-201ENST00000296682 CTXND1A0A1B0GTU2 59 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 SRRM4A7MD48 611 aaKnown RBP7.63□□□□□ -1.19
PRDM9-201ENST00000296682 C15orf62A8K5M9 175 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 ARL14EPLP0DKL9 152 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 HSPE1P61604 102 aaKnown RBP7.63□□□□□ -1.19
PRDM9-201ENST00000296682 TNXAQ16473 311 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 SPATA31B1PQ5VZV4 182 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 C15orf54Q8N8G6 183 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 DERL1Q9BUN8 251 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 CCDC168Q8NDH2 2452 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 K7ENP7 123 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 CXCL1P09341 107 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 ORM2P19652 201 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 S100PP25815 95 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 OR10J1P30954 320 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 RAB4BP61018 213 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 ZNF788Q6ZQV5 615 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 C1orf174Q8IYL3 243 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 SAA1P0DJI8 122 aaPredicted RBP7.63□□□□□ -1.19
PRDM9-201ENST00000296682 MGST1P10620 155 aaKnown RBP7.63□□□□□ -1.19
PRDM9-201ENST00000296682 FOSL1P15407 271 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 TMPRSS3P57727 454 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 SLC35B1P78383 322 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 PSG5Q15238 335 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 BSXQ3C1V8 233 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 ASPHD1Q5U4P2 390 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 KIR3DL3Q8N743 410 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 OR2T6Q8NHC8 308 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 Q8WTZ3 238 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 FAM210BQ96KR6 192 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 PARLQ9H300 379 aa7.63□□□□□ -1.19
PRDM9-201ENST00000296682 LRRK2Q5S007 2527 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 IGLV3-9A0A075B6K5 115 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 FAM90A26D6RGX4 464 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 ERHP84090 104 aaKnown RBP7.62□□□□□ -1.19
PRDM9-201ENST00000296682 RELBQ01201 579 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 ATP6V1FQ16864 119 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 ZNF506Q5JVG8 444 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 SETD2Q9BYW2 2564 aaPredicted RBP7.62□□□□□ -1.19
PRDM9-201ENST00000296682 MBP02144 154 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 CT45A6P0DMU7 189 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 CT45A5P0DMU8 189 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 CT45A7P0DMV0 189 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 LGALS4P56470 323 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 HABP2Q14520 560 aaPredicted RBP7.62□□□□□ -1.19
PRDM9-201ENST00000296682 TEPPQ6URK8 271 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 OR9G1Q8NH87 305 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 ZCCHC14Q8WYQ9 949 aaKnown RBP7.62□□□□□ -1.19
PRDM9-201ENST00000296682 NPVFQ9HCQ7 196 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 SEPSECSQ9HD40 501 aaKnown RBP7.62□□□□□ -1.19
PRDM9-201ENST00000296682 SSUH2Q9Y2M2 353 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 INSIG2Q9Y5U4 225 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 EPG5Q9HCE0 2579 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 CLDN34H7C241 214 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 FOXH1O75593 365 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 KBTBD11O94819 623 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 CDKN1AP38936 164 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 PRR31Q5SQ13 230 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 TREML4Q6UXN2 200 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 DPPA3Q6W0C5 159 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 CENPVQ7Z7K6 275 aaPredicted RBP7.62□□□□□ -1.19
PRDM9-201ENST00000296682 BLNKQ8WV28 456 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 UHRF2Q96PU4 802 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 COA4Q9NYJ1 87 aa7.62□□□□□ -1.19
PRDM9-201ENST00000296682 RPUSD1Q9UJJ7 312 aaKnown RBP7.62□□□□□ -1.19
PRDM9-201ENST00000296682 TRAV1-1A0A0B4J248 108 aa7.61□□□□□ -1.19
PRDM9-201ENST00000296682 ZNF729A6NN14 1252 aaPredicted RBP7.61□□□□□ -1.19
PRDM9-201ENST00000296682 TMEM178BH3BS89 294 aa7.61□□□□□ -1.19
PRDM9-201ENST00000296682 C16orf82Q7Z2V1 217 aa7.61□□□□□ -1.19
PRDM9-201ENST00000296682 NHLRC2Q8NBF2 726 aa7.61□□□□□ -1.19
PRDM9-201ENST00000296682 RPEQ96AT9 228 aa7.61□□□□□ -1.19
PRDM9-201ENST00000296682 ELOVL1Q9BW60 279 aa7.61□□□□□ -1.19
PRDM9-201ENST00000296682 NCOR1P1Q9H4R4 102 aa7.61□□□□□ -1.19
PRDM9-201ENST00000296682 ELOVL5Q9NYP7 299 aa7.61□□□□□ -1.19
PRDM9-201ENST00000296682 PRR27Q6MZM9 219 aa7.61□□□□□ -1.19
PRDM9-201ENST00000296682 STPG3Q8N7X2 389 aa7.61□□□□□ -1.19
PRDM9-201ENST00000296682 NEIL1Q96FI4 390 aaPredicted RBP7.61□□□□□ -1.19
PRDM9-201ENST00000296682 APOBEC3AP31941 199 aaPredicted RBP7.6□□□□□ -1.19
PRDM9-201ENST00000296682 TCL1AP56279 114 aa7.6□□□□□ -1.19
PRDM9-201ENST00000296682 SUMO1P63165 101 aaKnown RBP7.6□□□□□ -1.19
PRDM9-201ENST00000296682 NPIPB3Q92617 1050 aa7.6□□□□□ -1.19
PRDM9-201ENST00000296682 PSMG3Q9BT73 122 aaPredicted RBP7.6□□□□□ -1.19
PRDM9-201ENST00000296682 FAM103A1Q9BTL3 118 aaKnown RBP7.6□□□□□ -1.19
PRDM9-201ENST00000296682 GSX1Q9H4S2 264 aaPredicted RBP7.6□□□□□ -1.19
PRDM9-201ENST00000296682 LHBP01229 141 aa7.6□□□□□ -1.19
PRDM9-201ENST00000296682 C1QTNF9P0C862 333 aa7.6□□□□□ -1.19
PRDM9-201ENST00000296682 RPL8P62917 257 aaKnown RBP7.6□□□□□ -1.19
PRDM9-201ENST00000296682 CDSNQ15517 529 aa7.6□□□□□ -1.19
PRDM9-201ENST00000296682 PNKDQ8N490 385 aa7.6□□□□□ -1.19
PRDM9-201ENST00000296682 SLC35E1Q96K37 410 aa7.6□□□□□ -1.19
PRDM9-201ENST00000296682 PCGF1Q9BSM1 259 aa7.6□□□□□ -1.19
PRDM9-201ENST00000296682 UBTD1Q9HAC8 227 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms