RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 C2orf50Q96LR7 162 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 SERTAD4Q9NUC0 356 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 GSKIPQ9P0R6 139 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 HSPB7Q9UBY9 170 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 WSB1Q9Y6I7 421 aa12.51□□□□□ -0.41
MRPL55-201ENST00000295008 hCG_2014768A0A024R1R8 64 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 TRAV41A0A0B4J266 112 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 IGLC7A0M8Q6 106 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 G3V318 75 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 SCGB1D2O95969 90 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 SPCS3P61009 180 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 TNFRSF9Q07011 255 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 PDLIM3Q53GG5 364 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-201ENST00000295008 C19orf54Q5BKX5 351 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 LFNGQ8NES3 379 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 OR4F5Q8NH21 305 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 LINC01006Q8NI28 216 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 RBKSQ9H477 322 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 PLEKHA3Q9HB20 300 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 ZNF580Q9UK33 172 aa12.5□□□□□ -0.41
MRPL55-201ENST00000295008 TET2Q6N021 2002 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-201ENST00000295008 A0A1B0GVG6 124 aa12.49□□□□□ -0.41
MRPL55-201ENST00000295008 FAM90A26D6RGX4 464 aa12.49□□□□□ -0.41
MRPL55-201ENST00000295008 AREGP15514 252 aa12.49□□□□□ -0.41
MRPL55-201ENST00000295008 HOXA1P49639 335 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-201ENST00000295008 KRTAP24-1Q3LI83 254 aa12.49□□□□□ -0.41
MRPL55-201ENST00000295008 C11orf87Q6NUJ2 197 aa12.49□□□□□ -0.41
MRPL55-201ENST00000295008 UNQ5815/PRO19632Q6UWF5 114 aa12.49□□□□□ -0.41
MRPL55-201ENST00000295008 WDR89Q96FK6 387 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-201ENST00000295008 MAGT1Q9H0U3 335 aa12.49□□□□□ -0.41
MRPL55-201ENST00000295008 CACFD1Q9UGQ2 172 aa12.49□□□□□ -0.41
MRPL55-201ENST00000295008 A0A1W2PN81 502 aa12.48□□□□□ -0.41
MRPL55-201ENST00000295008 CEBPZOSA8MTT3 80 aa12.48□□□□□ -0.41
MRPL55-201ENST00000295008 REG1AP05451 166 aa12.48□□□□□ -0.41
MRPL55-201ENST00000295008 MDKP21741 143 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-201ENST00000295008 CHRNA7P36544 502 aa12.48□□□□□ -0.41
MRPL55-201ENST00000295008 NKX2-1P43699 371 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-201ENST00000295008 WT1-ASQ06250 92 aa12.48□□□□□ -0.41
MRPL55-201ENST00000295008 SRSF8Q9BRL6 282 aaKnown RBP12.48□□□□□ -0.41
MRPL55-201ENST00000295008 MBPP02686 304 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-201ENST00000295008 OR13C7P0DN81 318 aa12.47□□□□□ -0.41
MRPL55-201ENST00000295008 POLR2GP62487 172 aaKnown RBP eCLIP12.47□□□□□ -0.41
MRPL55-201ENST00000295008 ID3Q02535 119 aa12.47□□□□□ -0.41
MRPL55-201ENST00000295008 CFHR3Q02985 330 aa12.47□□□□□ -0.41
MRPL55-201ENST00000295008 TMEM267Q0VDI3 215 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-201ENST00000295008 IL15RAQ13261 267 aa12.47□□□□□ -0.41
MRPL55-201ENST00000295008 AKIRIN2Q53H80 203 aa12.47□□□□□ -0.41
MRPL55-201ENST00000295008 C19orf35Q6ZS72 473 aa12.47□□□□□ -0.41
MRPL55-201ENST00000295008 DTD1Q8TEA8 209 aa12.47□□□□□ -0.41
MRPL55-201ENST00000295008 NMES1Q9C002 83 aa12.47□□□□□ -0.41
MRPL55-201ENST00000295008 WNT10AQ9GZT5 417 aa12.47□□□□□ -0.41
MRPL55-201ENST00000295008 ENY2Q9NPA8 101 aa12.47□□□□□ -0.41
MRPL55-201ENST00000295008 RCL1Q9Y2P8 373 aaKnown RBP12.47□□□□□ -0.41
MRPL55-201ENST00000295008 CLPSL1A2RUU4 121 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 NPIPB5A8MRT5 1133 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 INS-IGF2F8WCM5 200 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 SYNGR2O43760 224 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 SSSCA1O60232 199 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 MED6O75586 246 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 IAPPP10997 89 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 PSMB6P28072 239 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 PPIFP30405 207 aaKnown RBP12.46□□□□□ -0.41
MRPL55-201ENST00000295008 S100A10P60903 97 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 CYCSP99999 105 aaKnown RBP12.46□□□□□ -0.41
MRPL55-201ENST00000295008 SRSF4Q08170 494 aaKnown RBP12.46□□□□□ -0.41
MRPL55-201ENST00000295008 RAB32Q13637 225 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 C10orf99Q6UWK7 81 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 HSD17B13Q7Z5P4 300 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-201ENST00000295008 MRPL41Q8IXM3 137 aaKnown RBP12.46□□□□□ -0.41
MRPL55-201ENST00000295008 KLHDC1Q8N7A1 406 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 OR5T1Q8NG75 326 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 FAM110DQ8TAY7 271 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-201ENST00000295008 TMEM68Q96MH6 324 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 ZNF436Q9C0F3 470 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-201ENST00000295008 LSM5Q9Y4Y9 91 aaKnown RBP12.46□□□□□ -0.41
MRPL55-201ENST00000295008 RNF114Q9Y508 228 aa12.46□□□□□ -0.41
MRPL55-201ENST00000295008 PSMB11A5LHX3 300 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 K7EPK0 472 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 WRBO00258 174 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 SOX15O60248 233 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 FBXO24O75426 580 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 GIPP09681 153 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-201ENST00000295008 CTRB1P17538 263 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 CTRB2Q6GPI1 263 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 ZNF329Q86UD4 541 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 TTC9CQ8N5M4 171 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 OR2C3Q8N628 320 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 CHAC2Q8WUX2 184 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 GON7Q9BXV9 100 aa12.45□□□□□ -0.42
MRPL55-201ENST00000295008 HEYLQ9NQ87 328 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-201ENST00000295008 CRYGCP07315 174 aa12.44□□□□□ -0.42
MRPL55-201ENST00000295008 PROK1P58294 105 aa12.44□□□□□ -0.42
MRPL55-201ENST00000295008 SLC35B1P78383 322 aa12.44□□□□□ -0.42
MRPL55-201ENST00000295008 ERHP84090 104 aaKnown RBP12.44□□□□□ -0.42
MRPL55-201ENST00000295008 FOXL1Q12952 345 aa12.44□□□□□ -0.42
MRPL55-201ENST00000295008 LRRC37A5PQ49AS3 106 aa12.44□□□□□ -0.42
MRPL55-201ENST00000295008 CENPVQ7Z7K6 275 aaPredicted RBP12.44□□□□□ -0.42
MRPL55-201ENST00000295008 C19orf24Q9BVV8 132 aa12.44□□□□□ -0.42
MRPL55-201ENST00000295008 HIPK2Q9H2X6 1198 aa12.44□□□□□ -0.42
MRPL55-201ENST00000295008 FBN3Q75N90 2809 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms