RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 SSBP4Q9BWG4 385 aaPredicted RBP10.53□□□□□ -0.72
SLX4-201ENST00000294008 FNDC4Q9H6D8 234 aaPredicted RBP10.53□□□□□ -0.72
SLX4-201ENST00000294008 hADV29S1A0JD25 119 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 TCRAP04437 139 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 ATXN8Q156A1 80 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 POC1AQ8NBT0 407 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 SMIM6P0DI80 62 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 PPP1R32Q7Z5V6 425 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 PLAC1Q9HBJ0 212 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 CHTOPQ9Y3Y2 248 aaKnown RBP10.53□□□□□ -0.72
SLX4-201ENST00000294008 ZNF638Q14966 1978 aaKnown RBP10.53□□□□□ -0.72
SLX4-201ENST00000294008 TRAV13-1A0A0B4J241 112 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 SLC17A3O00476 420 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 NBEAP1P0C6P0 100 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 ZNF146Q15072 292 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 MEGF9Q9H1U4 602 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 CGAP01215 116 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 FAM166AQ6J272 317 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 FAM216BQ8N7L0 139 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 C1orf159Q96HA4 380 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 PEF1Q9UBV8 284 aaKnown RBP10.53□□□□□ -0.72
SLX4-201ENST00000294008 CHKB-CPT1BH3BT56 60 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 GNG5P63218 68 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 DKK4Q9UBT3 224 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 DTX4Q9Y2E6 619 aa10.53□□□□□ -0.72
SLX4-201ENST00000294008 TRGV11A0A075B6L2 103 aa10.52□□□□□ -0.72
SLX4-201ENST00000294008 CISD3P0C7P0 127 aa10.52□□□□□ -0.72
SLX4-201ENST00000294008 NAT1P18440 290 aa10.52□□□□□ -0.72
SLX4-201ENST00000294008 UBE2BP63146 152 aa10.52□□□□□ -0.72
SLX4-201ENST00000294008 ZNF721Q8TF20 911 aa10.52□□□□□ -0.72
SLX4-201ENST00000294008 GATA2P23769 480 aaPredicted RBP10.52□□□□□ -0.73
SLX4-201ENST00000294008 ITGBL1O95965 494 aaPredicted RBP10.52□□□□□ -0.73
SLX4-201ENST00000294008 C8orf82Q6P1X6 216 aaPredicted RBP10.52□□□□□ -0.73
SLX4-201ENST00000294008 TMEM256Q8N2U0 113 aa10.52□□□□□ -0.73
SLX4-201ENST00000294008 OCIAD2Q56VL3 154 aa10.52□□□□□ -0.73
SLX4-201ENST00000294008 COQ2Q96H96 371 aa10.52□□□□□ -0.73
SLX4-201ENST00000294008 CLDN16Q9Y5I7 305 aa10.52□□□□□ -0.73
SLX4-201ENST00000294008 NALCNQ8IZF0 1738 aa10.52□□□□□ -0.73
SLX4-201ENST00000294008 TRBV5-4A0A0C4DH59 114 aa10.52□□□□□ -0.73
SLX4-201ENST00000294008 RHOGP84095 191 aa10.52□□□□□ -0.73
SLX4-201ENST00000294008 FOXD3Q9UJU5 478 aaPredicted RBP10.52□□□□□ -0.73
SLX4-201ENST00000294008 IGFBP2P18065 325 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 ZCCHC24Q8N2G6 241 aaKnown RBP10.51□□□□□ -0.73
SLX4-201ENST00000294008 MAPK1IP1LQ8NDC0 245 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 IMMP2LQ96T52 175 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 Q9H3A6 140 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 SERF2P84101 59 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 MORN3Q6PF18 240 aaPredicted RBP10.51□□□□□ -0.73
SLX4-201ENST00000294008 FAM19A2Q8N3H0 131 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 IMMP1LQ96LU5 166 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 DDA1Q9BW61 102 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 SRXN1Q9BYN0 137 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 ZMAT4Q9H898 229 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 SLX4Q8IY92 1834 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 A0A096LPF7 62 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 H3BUT2 72 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 CXCL3P19876 107 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 GCHFRP30047 84 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 SMRP1Q8NCR6 262 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 TRAF4Q9BUZ4 470 aaPredicted RBP10.51□□□□□ -0.73
SLX4-201ENST00000294008 JPT1Q9UK76 154 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 H0YL77 283 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 DEFB105AQ8NG35 78 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 KLF12Q9Y4X4 402 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 ERCC8Q13216 396 aa10.51□□□□□ -0.73
SLX4-201ENST00000294008 MRPL32Q9BYC8 188 aaKnown RBP10.51□□□□□ -0.73
SLX4-201ENST00000294008 CTDSPLO15194 276 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 HOGA1Q86XE5 327 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 TNFRSF6BO95407 300 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 PRR31Q5SQ13 230 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 GAGE2AQ6NT46 116 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 SLC50A1Q9BRV3 221 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 TMEM30AQ9NV96 361 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 LSM4Q9Y4Z0 139 aaKnown RBP10.5□□□□□ -0.73
SLX4-201ENST00000294008 SS18Q15532 418 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 KLHDC2Q9Y2U9 406 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 NPIPB13A6NJU9 1138 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 NPIPB5A8MRT5 1133 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 GPX4P36969 197 aaPredicted RBP10.5□□□□□ -0.73
SLX4-201ENST00000294008 BAALCQ8WXS3 180 aa10.5□□□□□ -0.73
SLX4-201ENST00000294008 F8VVB4 439 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 F8VWA3 439 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 ZP1P60852 638 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 DPRXA6NFQ7 191 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 PGPEP1LA6NFU8 196 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 GNLYP22749 145 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 TAL2Q16559 108 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 BRD3OSQ6XYD6 125 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 HMSDA8MTL9 139 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 WNT2P09544 360 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 ZNF876PQ49A33 203 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 ORMDL2Q53FV1 153 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 RPP21Q9H633 154 aaKnown RBP10.49□□□□□ -0.73
SLX4-201ENST00000294008 TRAV8-3A0A0A6YYJ7 113 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 A0A1B0GUT8 65 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 DAD1P61803 113 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 TCTEX1D4Q5JR98 221 aa10.49□□□□□ -0.73
SLX4-201ENST00000294008 TRAV41A0A0B4J266 112 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 SIGLEC15Q6ZMC9 328 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 FAM181AQ8N9Y4 354 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms