RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 GATAD1Q8WUU5 269 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 EPOPA6NHQ4 379 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 LAMTOR1Q6IAA8 161 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 SDHCQ99643 169 aaPredicted RBP13.66□□□□□ -0.22
SSRP1-202ENST00000293880 TMEM106BQ9NUM4 274 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 EVI2AP22794 236 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 NPDC1Q9NQX5 325 aaPredicted RBP13.66□□□□□ -0.22
SSRP1-202ENST00000293880 TNFRSF18Q9Y5U5 241 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 TRAV8-1A0A0A6YYK1 113 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 TRGV3P03979 118 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 OR5P3Q8WZ94 311 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 NEUROG1Q92886 237 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 ZNF257Q9Y2Q1 563 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 COL4A5P29400 1685 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 ZNF562Q6V9R5 426 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 TMEM54Q969K7 222 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 MRPL32Q9BYC8 188 aaKnown RBP13.66□□□□□ -0.22
SSRP1-202ENST00000293880 TMEM74BQ9NUR3 256 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 JPT1Q9UK76 154 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 IGHV1-69-2A0A0G2JMI3 117 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 GFRA3O60609 400 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 COX6A1P12074 109 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 FBLIM1Q8WUP2 373 aa13.66□□□□□ -0.22
SSRP1-202ENST00000293880 C1orf100Q5SVJ3 147 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 TRAV30A0A087WSZ9 112 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 PRR33A8MZF0 331 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 IGKV1D-33P01593 117 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 IGKV1-33P01594 117 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 TBR1Q16650 682 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 FBXL15Q9H469 300 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 C17orf98A8MV24 154 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 SERF1AO75920 110 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 GAGE2BQ13066 116 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 GAGE2EQ4V326 116 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.65□□□□□ -0.22
SSRP1-202ENST00000293880 CLEC19AQ6UXS0 136 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 RCC1LQ96I51 464 aaKnown RBP13.65□□□□□ -0.22
SSRP1-202ENST00000293880 JMJD8Q96S16 334 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 GAGE2DQ9UEU5 116 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 RGPD3A6NKT7 1758 aaPredicted RBP13.65□□□□□ -0.22
SSRP1-202ENST00000293880 TRAV2A0A0B4J234 112 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 A0A1B0GW15 77 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 LOC390937A0A1W2PQ73 354 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 ASIPP42127 132 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 SNRPD3P62318 126 aaKnown RBP13.65□□□□□ -0.22
SSRP1-202ENST00000293880 STPG1Q5TH74 334 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 GP6Q9HCN6 339 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 BRWD3Q6RI45 1802 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 PF4P02776 101 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 CELA3AP09093 270 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 SHISA5Q8N114 240 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 CLEC7AQ9BXN2 247 aa13.65□□□□□ -0.22
SSRP1-202ENST00000293880 LHX2P50458 406 aa13.64□□□□□ -0.23
SSRP1-202ENST00000293880 QSER1Q2KHR3 1735 aa13.64□□□□□ -0.23
SSRP1-202ENST00000293880 IGKV1D-43A0A0B4J1Z2 117 aa13.64□□□□□ -0.23
SSRP1-202ENST00000293880 PLXNB2O15031 1838 aa13.64□□□□□ -0.23
SSRP1-202ENST00000293880 TRAV5A0A0B4J249 113 aa13.64□□□□□ -0.23
SSRP1-202ENST00000293880 HOXA5P20719 270 aa13.64□□□□□ -0.23
SSRP1-202ENST00000293880 SRSF6Q13247 344 aaKnown RBP13.64□□□□□ -0.23
SSRP1-202ENST00000293880 SHISA3A0PJX4 238 aa13.63□□□□□ -0.23
SSRP1-202ENST00000293880 LAIR2Q6ISS4 152 aa13.63□□□□□ -0.23
SSRP1-202ENST00000293880 RTBDNQ9BSG5 229 aaPredicted RBP13.63□□□□□ -0.23
SSRP1-202ENST00000293880 NDUFAF3Q9BU61 184 aa13.63□□□□□ -0.23
SSRP1-202ENST00000293880 PKIBQ9C010 78 aa13.63□□□□□ -0.23
SSRP1-202ENST00000293880 RSPO3Q9BXY4 272 aaPredicted RBP13.63□□□□□ -0.23
SSRP1-202ENST00000293880 RPP21Q9H633 154 aaKnown RBP13.63□□□□□ -0.23
SSRP1-202ENST00000293880 A0A1W2PRS3 328 aa13.63□□□□□ -0.23
SSRP1-202ENST00000293880 FHL5Q5TD97 284 aa13.63□□□□□ -0.23
SSRP1-202ENST00000293880 C2orf88Q9BSF0 95 aa13.63□□□□□ -0.23
SSRP1-202ENST00000293880 RPRMQ9NS64 109 aa13.63□□□□□ -0.23
SSRP1-202ENST00000293880 TIAF1O95411 115 aa13.63□□□□□ -0.23
SSRP1-202ENST00000293880 NRN1Q9NPD7 142 aa13.63□□□□□ -0.23
SSRP1-202ENST00000293880 PLSCR4Q9NRQ2 329 aa13.63□□□□□ -0.23
SSRP1-202ENST00000293880 HOXA3O43365 443 aaPredicted RBP13.62□□□□□ -0.23
SSRP1-202ENST00000293880 EGR4Q05215 589 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 OR10W1Q8NGF6 305 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 CLDND2Q8NHS1 167 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 VKORC1Q9BQB6 163 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 C1QL4Q86Z23 238 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 TRIP12Q14669 1992 aaPredicted RBP13.62□□□□□ -0.23
SSRP1-202ENST00000293880 OTOFQ9HC10 1997 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 PPIFP30405 207 aaKnown RBP13.62□□□□□ -0.23
SSRP1-202ENST00000293880 SLC25A45Q8N413 288 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 Q9H3A6 140 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A26D6RGX4 464 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 SRP19P09132 144 aaKnown RBP13.62□□□□□ -0.23
SSRP1-202ENST00000293880 TDGF1P13385 188 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 ZNF585BQ52M93 769 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 SAMD5Q5TGI4 173 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 KIR3DL3Q8N743 410 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 OR2K2Q8NGT1 345 aa13.62□□□□□ -0.23
SSRP1-202ENST00000293880 PDLIM4P50479 330 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 OR9G1Q8NH87 305 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 SCN8AQ9UQD0 1980 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 ATP5J2P56134 94 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 UNQ9370/PRO34162Q6UXP9 181 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 A0A087WV48 116 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 PRR32B1ATL7 298 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 IGHV3-11P01762 117 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 IGHMP01871 453 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms