RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 C2orf83Q53S99 150 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 PAQR4Q8N4S7 273 aaPredicted RBP10.75□□□□□ -0.69
PTCD1-201ENST00000292478 ABHD17AQ96GS6 310 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 DEPPQ9NTK1 212 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 DOCK4Q8N1I0 1966 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 UPK2O00526 184 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 ATXN7O15265 892 aaPredicted RBP10.75□□□□□ -0.69
PTCD1-201ENST00000292478 MOSP00540 346 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 IGFBP2P18065 325 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 BIVMQ86UB2 503 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 ZSWIM8A7E2V4 1837 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 TFF3Q07654 80 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 RRN3P1Q2M238 152 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 SLC25A34Q6PIV7 304 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 TMEM144Q7Z5S9 345 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 COPS9Q8WXC6 57 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 RNASE6Q93091 150 aaKnown RBP10.74□□□□□ -0.69
PTCD1-201ENST00000292478 PEAR1Q5VY43 1037 aaPredicted RBP10.74□□□□□ -0.69
PTCD1-201ENST00000292478 Q6AWC8 147 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 ZNF502Q8TBZ5 544 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 GFI1Q99684 422 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 GPR61Q9BZJ8 451 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 A0A0G2JLM5 398 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 PAPPA-AS1Q5QFB9 102 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 LY6G6FQ5SQ64 297 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 TMEM190Q8WZ59 177 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 SEMA5BQ9P283 1151 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 PEX7O00628 323 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 CELA3BP08861 270 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 SAMD13Q5VXD3 122 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 WDR82Q6UXN9 313 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 MRPL20Q9BYC9 149 aaKnown RBP10.74□□□□□ -0.69
PTCD1-201ENST00000292478 SDF2L1Q9HCN8 221 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 PPP1R17O96001 155 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 C19orf54Q5BKX5 351 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 TEX45Q8NA69 505 aa10.74□□□□□ -0.69
PTCD1-201ENST00000292478 EIF3GO75821 320 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTCD1-201ENST00000292478 DDTP30046 118 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 ZIC4Q8N9L1 334 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 RAB37Q96AX2 223 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 GPR82Q96P67 336 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 FBXL15Q9H469 300 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 MST1P26927 711 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 CGB1A6NKQ9 187 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 C15orf61A6NNL5 157 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 UBE2L6O14933 153 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 CGAP01215 116 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 COX6CP09669 75 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 ID3Q02535 119 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 TBR1Q16650 682 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 PSMG4Q5JS54 123 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 C21orf62Q9NYP8 219 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 TRAV24A0A0B4J272 114 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 HERPUD1Q15011 391 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 MORN2Q502X0 79 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 OR52E5Q8NH55 327 aa10.73□□□□□ -0.69
PTCD1-201ENST00000292478 RNF224P0DH78 156 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 ICAM4Q14773 271 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 LY6EQ16553 131 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 ZNF324BQ6AW86 544 aaPredicted RBP10.72□□□□□ -0.69
PTCD1-201ENST00000292478 ARPC1AQ92747 370 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 K7ERU9 68 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 AMMECR1LQ6DCA0 310 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 MIEN1Q9BRT3 115 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 AUP1Q9Y679 476 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 ASXL3Q9C0F0 2248 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 ANK1P16157 1881 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 FGF16O43320 207 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 IGKV1D-33P01593 117 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 IGKV1-33P01594 117 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 TRGV3P03979 118 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 PPP1R27Q86WC6 154 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 ZNF319Q9P2F9 582 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 FBXL7Q9UJT9 491 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 IGKV1D-13A0A0B4J2D9 117 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 ZNF324O75467 553 aaPredicted RBP10.72□□□□□ -0.69
PTCD1-201ENST00000292478 IGKV1-13P0DP09 117 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 NABP1Q96AH0 204 aa10.72□□□□□ -0.69
PTCD1-201ENST00000292478 CLPSP04118 112 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 FAM159AQ6UWV7 190 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 TNFRSF14Q92956 283 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 KIR2DL4Q99706 377 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 SAA2-SAA4A0A096LPE2 208 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 A0A0A6YYD4 124 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 SAA2P0DJI9 122 aaPredicted RBP10.71□□□□□ -0.69
PTCD1-201ENST00000292478 FABP2P12104 132 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 OR4D5Q8NGN0 318 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 DUX5Q96PT3 197 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 NEU1Q99519 415 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 COTL1Q14019 142 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 FAM201AQ5SY85 155 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 CYB5R2Q6BCY4 276 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 GGNQ86UU5 652 aa10.71□□□□□ -0.69
PTCD1-201ENST00000292478 LDLRAD4O15165 306 aa10.71□□□□□ -0.7
PTCD1-201ENST00000292478 EFNA2O43921 213 aa10.71□□□□□ -0.7
PTCD1-201ENST00000292478 MBNL2Q5VZF2 373 aaKnown RBP10.71□□□□□ -0.7
PTCD1-201ENST00000292478 CIARTQ8N365 385 aaPredicted RBP10.71□□□□□ -0.7
PTCD1-201ENST00000292478 DCTN5Q9BTE1 182 aa10.71□□□□□ -0.7
PTCD1-201ENST00000292478 SPRR3Q9UBC9 169 aa10.71□□□□□ -0.7
PTCD1-201ENST00000292478 IL18BPO95998 194 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms