RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 FNDC4Q9H6D8 234 aaPredicted RBP9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 NCBP2LA6PVI3 153 aaKnown RBP9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 LIPFP07098 398 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 HERVK_113P61574 105 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 SMAGPQ0VAQ4 97 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 LRRC75BQ2VPJ9 315 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 TM4SF20Q53R12 229 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 NEU1Q99519 415 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 ATP5G3P48201 142 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 PRNTQ86SH4 94 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 LINC00596Q86U02 117 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 PRNDQ9UKY0 176 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 A0A1B0GWB2 263 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 F2RL2O00254 374 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 FOXH1O75593 365 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 C20orf204Q6ZNR8 217 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 SEBOXQ9HB31 216 aaPredicted RBP9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 DKK4Q9UBT3 224 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 TMEM238LA0A1B0GVL6 79 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 A6NJY4 79 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 PRR32B1ATL7 298 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 SYNGR1O43759 233 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 IGHV1-2P23083 117 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 SGK494Q96LW2 274 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 MESP1Q9BRJ9 268 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 SNHG12Q9BXW3 62 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 MDC1Q14676 2089 aaKnown RBP9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 TP53BP1Q12888 1972 aaPredicted RBP9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 IGHV1-69-2A0A0G2JMI3 117 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 PLAUP00749 431 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 CD33P20138 364 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 EGR4Q05215 589 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 AMMECR1LQ6DCA0 310 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 ZNF841Q6ZN19 808 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 FAM168AQ92567 244 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 C9JQL5 133 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 F5H697 171 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 CA1P00915 261 aaPredicted RBP9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 GCHFRP30047 84 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 DLX1P56177 255 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 DSCR9P59020 149 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 RELQ04864 619 aaPredicted RBP9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 ASPHD2Q6ICH7 369 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 ZNF502Q8TBZ5 544 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 ITLN1Q8WWA0 313 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 TMEM242Q9NWH2 141 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 SLC25A10Q9UBX3 287 aaPredicted RBP9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 HILPDAQ9Y5L2 63 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 TRAV9-2A0A087WT02 112 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 GZMHP20718 246 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 TMEM177Q53S58 311 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 KLF14Q8TD94 323 aaPredicted RBP9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 RTN4RQ9BZR6 473 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 JKAMPQ9P055 326 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 ZNF256Q9Y2P7 627 aaPredicted RBP9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 SELENOKQ9Y6D0 94 aa9.59□□□□□ -0.87
NPC1L1-201ENST00000289547 PGPA6NDG6 321 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 TMEM256Q8N2U0 113 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 CHODLQ9H9P2 273 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 KIF26BQ2KJY2 2108 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 CACNA1BQ00975 2339 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 MBD3L4A6NDZ8 208 aaPredicted RBP9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 MBD3L3A6NE82 208 aaPredicted RBP9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 MBD3L5A6NJ08 208 aaPredicted RBP9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 C17orf51A8MQB3 221 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 H7C2G1 150 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 UBE2V1Q13404 147 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 TPRX1Q8N7U7 411 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 OR51G1Q8NGK1 321 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 MBD3L2Q8NHZ7 208 aaPredicted RBP9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 SIGMAR1Q99720 223 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 PLSCR4Q9NRQ2 329 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 C1RLQ9NZP8 487 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 SCO2A0A1W2PP80 73 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 SMAD7O15105 426 aaKnown RBP9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 NPSP0C0P6 89 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 SLC25A17O43808 307 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 CECR9P0C854 216 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 CKS2P33552 79 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 SSTR5P35346 364 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 CEACAM21Q3KPI0 293 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 CCDC144NLQ6NUI1 221 aa9.58□□□□□ -0.88
NPC1L1-201ENST00000289547 M0R3E3 92 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 ZNHIT1O43257 154 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 GPR183P32249 361 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 WNT5BQ9H1J7 359 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 THYN1Q9P016 225 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 M0QZ24 198 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 IGFBP3P17936 291 aaPredicted RBP9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 UCP1P25874 307 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 VSTM2AQ8TAG5 236 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 KIF26AQ9ULI4 1882 aaPredicted RBP9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 RRHO14718 337 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 ZNF324O75467 553 aaPredicted RBP9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 TPTE2P1Q5T6R2 138 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 ZNF525Q8N782 197 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 NPCDR1Q9BY65 106 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 PGPEP1LA6NFU8 196 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 DMRTA2Q96SC8 542 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms