RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 IGHV3-35A0A0C4DH35 117 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 IGLC7A0M8Q6 106 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 MEIS3P1A6NDR6 274 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 TGOLN2O43493 480 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 FGF2P09038 288 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 OR13C7P0DN81 318 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 TAS2R46P59540 309 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 POU2AF1Q16633 256 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 KLK9Q2XQG4 91 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 SLC25A24Q6NUK1 477 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 OR2C3Q8N628 320 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 GDPD1Q8N9F7 314 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 OR1L8Q8NGR8 309 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 VN1R17PQ8TDU5 208 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 KLK9Q9UKQ9 250 aa10.53□□□□□ -0.72
TPM1-202ENST00000288398 TRAV3A0A0B4J244 114 aa10.52□□□□□ -0.73
TPM1-202ENST00000288398 CXorf65A6NEN9 183 aa10.52□□□□□ -0.73
TPM1-202ENST00000288398 MARCH11A6NNE9 402 aa10.52□□□□□ -0.73
TPM1-202ENST00000288398 RLN1P04808 185 aa10.52□□□□□ -0.73
TPM1-202ENST00000288398 TMEM69Q5SWH9 247 aa10.52□□□□□ -0.73
TPM1-202ENST00000288398 UNQ9165/PRO28630Q6UXU0 137 aa10.52□□□□□ -0.73
TPM1-202ENST00000288398 UBAC2Q8NBM4 344 aa10.52□□□□□ -0.73
TPM1-202ENST00000288398 OR5H2Q8NGV7 314 aa10.52□□□□□ -0.73
TPM1-202ENST00000288398 LSM10Q969L4 123 aaKnown RBP10.52□□□□□ -0.73
TPM1-202ENST00000288398 BSCL2Q96G97 398 aaPredicted RBP10.52□□□□□ -0.73
TPM1-202ENST00000288398 SPAG8Q99932 426 aaPredicted RBP10.52□□□□□ -0.73
TPM1-202ENST00000288398 C20orf24Q9BUV8 137 aa10.52□□□□□ -0.73
TPM1-202ENST00000288398 RNF167Q9H6Y7 350 aa10.52□□□□□ -0.73
TPM1-202ENST00000288398 DAZ1Q9NQZ3 744 aaKnown RBP10.52□□□□□ -0.73
TPM1-202ENST00000288398 OR2T8A6NH00 312 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 CGB1A6NKQ9 187 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 XRCC3O43542 346 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 F2RP25116 425 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 Q56UQ5 140 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 UBE2NLQ5JXB2 153 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 SPSB3Q6PJ21 355 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 OR10W1Q8NGF6 305 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 TMEM190Q8WZ59 177 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 TMEM56Q96MV1 263 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 ZNF2Q9BSG1 426 aaPredicted RBP10.51□□□□□ -0.73
TPM1-202ENST00000288398 C6orf62Q9GZU0 229 aaPredicted RBP10.51□□□□□ -0.73
TPM1-202ENST00000288398 C5orf66Q9H5L9 145 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 VCX3AQ9NNX9 186 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 FKBP11Q9NYL4 201 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 OR51B2Q9Y5P1 312 aa10.51□□□□□ -0.73
TPM1-202ENST00000288398 TEX50A0A1B0GTY4 177 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 OR4C46A6NHA9 309 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 KRASP01116 189 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 PMP2P02689 132 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 SERPINE2P07093 398 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 C8orf88P0DMB2 117 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 LPAR6P43657 344 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 PMS2P11Q13670 270 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 OR6F1Q8NGZ6 308 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 TSC22D3Q99576 134 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 OVOL2Q9BRP0 275 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 ZNF436Q9C0F3 470 aaPredicted RBP10.5□□□□□ -0.73
TPM1-202ENST00000288398 C21orf62Q9NYP8 219 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 PRNDQ9UKY0 176 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 SACSQ9NZJ4 4579 aa10.5□□□□□ -0.73
TPM1-202ENST00000288398 IGHV3-21A0A0B4J1V1 117 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 NDUFA4O00483 81 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 UBE2CO00762 179 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 PGLYRP1O75594 196 aaPredicted RBP10.49□□□□□ -0.73
TPM1-202ENST00000288398 GNRHRP30968 328 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 BMI1P35226 326 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 RFX2P48378 723 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 TSPAN5P62079 268 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 STPG3Q8N7X2 389 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 SAMD12Q8N8I0 201 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 MOB3AQ96BX8 217 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 DGCR14Q96DF8 476 aaKnown RBP10.49□□□□□ -0.73
TPM1-202ENST00000288398 ATP6V0BQ99437 205 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 UBQLN2Q9UHD9 624 aa10.49□□□□□ -0.73
TPM1-202ENST00000288398 F11RQ9Y624 299 aaKnown RBP10.49□□□□□ -0.73
TPM1-202ENST00000288398 SMIM31A0A1B0GVY4 71 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 NUPR2A6NF83 97 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 GPR31O00270 319 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 TSPAN4O14817 238 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 NUPL2O15504 423 aaKnown RBP10.48□□□□□ -0.73
TPM1-202ENST00000288398 SPRY2O43597 315 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 PRSS3P35030 304 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 G6PCP35575 357 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 TAS2R20P59543 309 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 RELQ04864 619 aaPredicted RBP10.48□□□□□ -0.73
TPM1-202ENST00000288398 WT1-ASQ06250 92 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 LPCAT3Q6P1A2 487 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 DHRS11Q6UWP2 260 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 TMEM217Q8N7C4 229 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 OR5B3Q8NH48 314 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 STARD9Q9P2P6 4700 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 CSMD3Q7Z407 3707 aa10.48□□□□□ -0.73
TPM1-202ENST00000288398 YIF1AO95070 293 aa10.47□□□□□ -0.73
TPM1-202ENST00000288398 DEFB135Q30KP9 77 aa10.47□□□□□ -0.73
TPM1-202ENST00000288398 KCTD21Q4G0X4 260 aa10.47□□□□□ -0.73
TPM1-202ENST00000288398 Q6ZWC4 215 aa10.47□□□□□ -0.73
TPM1-202ENST00000288398 OR4A16Q8NH70 328 aa10.47□□□□□ -0.73
TPM1-202ENST00000288398 SCARB1Q8WTV0 552 aa10.47□□□□□ -0.73
TPM1-202ENST00000288398 FCAMRQ8WWV6 532 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms