RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 HBBP68871 147 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 ATP1A1-AS1Q5TC04 95 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 UNQ5815/PRO19632Q6UWF5 114 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 CNOT1A5YKK6 2376 aaKnown RBP13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 STRCP1A6NGW2 1772 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 IGKV3D-15A0A087WSY6 115 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 IGKV3-15P01624 115 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 TMEM56-RWDD3S4R434 201 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 A0A1B0GWJ7 208 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 LINC00305Q7Z4B0 112 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 CHCHD2Q9Y6H1 151 aaPredicted RBP13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 COL5A3P25940 1745 aaPredicted RBP13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 SMAGPQ0VAQ4 97 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 TCF24Q7RTU0 167 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 OR4D5Q8NGN0 318 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 SNHG12Q9BXW3 62 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 EPOPA6NHQ4 379 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 IGFBP2P18065 325 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 TM4SF20Q53R12 229 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 TCF23Q7RTU1 214 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 OR2K2Q8NGT1 345 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 GFI1Q99684 422 aa13.92□□□□□ -0.18
SH3RF1-201ENST00000284637 TRAV30A0A087WSZ9 112 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 MFAP4P55083 255 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 CX3CL1P78423 397 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 FAM169BQ8N8A8 192 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 METTL26Q96S19 204 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 MRPL32Q9BYC8 188 aaKnown RBP13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 SHANK3Q9BYB0 1731 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 ITGB1BP1O14713 200 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 ATXN7O15265 892 aaPredicted RBP13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 AMMECR1LQ6DCA0 310 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 FNDC4Q9H6D8 234 aaPredicted RBP13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 IGHV2-5P01817 119 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 IL4P05112 153 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 SRSF4Q08170 494 aaKnown RBP13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 ZNF525Q8N782 197 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 PHLDA3Q9Y5J5 127 aa13.91□□□□□ -0.18
SH3RF1-201ENST00000284637 IGKV3D-11A0A0A0MRZ8 115 aa13.9□□□□□ -0.18
SH3RF1-201ENST00000284637 CELA3AP09093 270 aa13.9□□□□□ -0.18
SH3RF1-201ENST00000284637 A0A1W2PR77 199 aa13.9□□□□□ -0.18
SH3RF1-201ENST00000284637 PF4V1P10720 104 aa13.9□□□□□ -0.18
SH3RF1-201ENST00000284637 VCX2Q9H322 139 aa13.9□□□□□ -0.18
SH3RF1-201ENST00000284637 PLSCR2Q9NRY7 297 aa13.9□□□□□ -0.18
SH3RF1-201ENST00000284637 ZNF257Q9Y2Q1 563 aa13.9□□□□□ -0.18
SH3RF1-201ENST00000284637 PSMG4Q5JS54 123 aa13.9□□□□□ -0.18
SH3RF1-201ENST00000284637 C18orf15Q96N68 181 aa13.9□□□□□ -0.18
SH3RF1-201ENST00000284637 DCTN5Q9BTE1 182 aa13.9□□□□□ -0.18
SH3RF1-201ENST00000284637 COL11A2P13942 1736 aaPredicted RBP13.9□□□□□ -0.18
SH3RF1-201ENST00000284637 MED12Q93074 2177 aa13.9□□□□□ -0.19
SH3RF1-201ENST00000284637 COX6CP09669 75 aa13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 OR9G1Q8NH87 305 aa13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 RBFOX2O43251 390 aaKnown RBP eCLIP13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 FAM106CPP0CH98 169 aa13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 DYNLRB2Q8TF09 96 aa13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 CFHR5Q9BXR6 569 aa13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 WFDC1Q9HC57 220 aa13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 FBLN5Q9UBX5 448 aa13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 IGHV3OR16-13A0A075B7E8 117 aa13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 IGHV3-74A0A0B4J1X5 117 aa13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 GATA2P23769 480 aaPredicted RBP13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 TIMP4Q99727 224 aa13.89□□□□□ -0.19
SH3RF1-201ENST00000284637 IGKV1D-13A0A0B4J2D9 117 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 IGKV1-9A0A0C4DH69 117 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 MUC21A0A0G2JKD1 596 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 MUC21A0A140T8X8 626 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 IGKV1-13P0DP09 117 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 EMP1P54849 157 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 MUC21Q5SSG8 566 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 TPTE2P1Q5T6R2 138 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 NEUROG1Q92886 237 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 MRPL13Q9BYD1 178 aaKnown RBP13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 SOX21Q9Y651 276 aaPredicted RBP13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 RPS20P60866 119 aaKnown RBP13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 SEC11AP67812 179 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 HIST1H1AQ02539 215 aaPredicted RBP13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 ACSF3Q4G176 576 aaPredicted RBP13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 OR13A1Q8NGR1 328 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 ZNF414Q96IQ9 312 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 TRAV8-6A0A0B4J262 113 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 PPIAL4CA0A0B4J2A2 164 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 LYPD3O95274 346 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 NBEAP1P0C6P0 100 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 PPIAL4GP0DN37 164 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 CTSSP25774 331 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 ADIPOQQ15848 244 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 FAM53AQ6NSI3 398 aaPredicted RBP13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 GAGE1Q13065 139 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 FAM201AQ5SY85 155 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 PPP1R32Q7Z5V6 425 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 PAQR4Q8N4S7 273 aaPredicted RBP13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 TTC9CQ8N5M4 171 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 MBD3L1Q8WWY6 194 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 DNASE2BQ8WZ79 361 aa13.88□□□□□ -0.19
SH3RF1-201ENST00000284637 STAG3L3P0CL85 134 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 TMEM186Q96B77 213 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 ELOVL5Q9NYP7 299 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 C1QTNF9BB2RNN3 333 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 PSG9Q00887 426 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 ACP7Q6ZNF0 438 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms