RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 PPP1R27Q86WC6 154 aa10.64□□□□□ -0.71
ACER3-201ENST00000278544 CITED4Q96RK1 184 aa10.64□□□□□ -0.71
ACER3-201ENST00000278544 SIGLEC9Q9Y336 463 aa10.64□□□□□ -0.71
ACER3-201ENST00000278544 H3BUX3 64 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 MOSP00540 346 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 TUSC1Q2TAM9 212 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 SLC51BQ86UW2 128 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 SSMEM1Q8WWF3 244 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 GON7Q9BXV9 100 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 KIAA1456Q9P272 454 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 LINC01548A6NM66 108 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 AGPAT2O15120 278 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 HMGB3O15347 200 aaKnown RBP10.63□□□□□ -0.71
ACER3-201ENST00000278544 SPCS3P61009 180 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 ETV3LQ6ZN32 361 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 THNSL2Q86YJ6 484 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 ASB13Q8WXK3 278 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 AJUBAQ96IF1 538 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 WT1-ASQ06250 92 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 SLC38A11Q08AI6 406 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 DHRS7BQ6IAN0 325 aaPredicted RBP10.63□□□□□ -0.71
ACER3-201ENST00000278544 C1orf122Q6ZSJ8 110 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 TMEM14BQ9NUH8 114 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 WSB1Q9Y6I7 421 aa10.63□□□□□ -0.71
ACER3-201ENST00000278544 IL6RP08887 468 aaPredicted RBP10.62□□□□□ -0.71
ACER3-201ENST00000278544 OR8U8P0C7N1 319 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 ELLP55199 621 aaPredicted RBP10.62□□□□□ -0.71
ACER3-201ENST00000278544 KIR3DL3Q8N743 410 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 C8orf31Q8N9H6 132 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 TMEM170AQ8WVE7 144 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 SLC25A31Q9H0C2 315 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 C11orf1Q9H5F2 150 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 SLA2Q9H6Q3 261 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 SPNS3Q6ZMD2 512 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 BAP18Q8IXM2 172 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 OR5T1Q8NG75 326 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 OR1S2Q8NGQ3 325 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 UBQLN2Q9UHD9 624 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 PRNDQ9UKY0 176 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 C15orf62A8K5M9 175 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 NBR2O15453 112 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 SOX15O60248 233 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 MED6O75586 246 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 LYL1P12980 280 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 C4BPBP20851 252 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 PRSS8Q16651 343 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 TMEM182Q6ZP80 229 aaPredicted RBP10.62□□□□□ -0.71
ACER3-201ENST00000278544 MISP3Q96FF7 219 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 CXorf58Q96LI9 332 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 UNKLQ9H9P5 680 aaKnown RBP10.62□□□□□ -0.71
ACER3-201ENST00000278544 ZFP57Q9NU63 452 aa10.62□□□□□ -0.71
ACER3-201ENST00000278544 SULT1A1P50225 295 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 ZNF345Q14585 488 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 ECSCRQ19T08 205 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 DEFB112Q30KQ8 113 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 OR2T10Q8NGZ9 312 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 ACY3Q96HD9 319 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 CGB1A6NKQ9 187 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 RPL27AP46776 148 aaKnown RBP10.61□□□□□ -0.71
ACER3-201ENST00000278544 NDPQ00604 133 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 BAXQ07812 192 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 FXYD3Q14802 87 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 HIST2H2BDQ6DRA6 164 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 CCDC144NLQ6NUI1 221 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 PUSL1Q8N0Z8 303 aaKnown RBP10.61□□□□□ -0.71
ACER3-201ENST00000278544 UBAC2Q8NBM4 344 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 SLC24A4Q8NFF2 622 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 OR10P1Q8NGE3 313 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 OR1L8Q8NGR8 309 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 TSNAXQ99598 290 aaKnown RBP10.61□□□□□ -0.71
ACER3-201ENST00000278544 GSX1Q9H4S2 264 aaPredicted RBP10.61□□□□□ -0.71
ACER3-201ENST00000278544 COA4Q9NYJ1 87 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 BET1LQ9NYM9 111 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 IFNA7P01567 189 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 IGHV3-23P01764 117 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 SLC25A6P12236 298 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 TPT1P13693 172 aaKnown RBP10.61□□□□□ -0.71
ACER3-201ENST00000278544 GATA2P23769 480 aaPredicted RBP10.61□□□□□ -0.71
ACER3-201ENST00000278544 NPY1RP25929 384 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 LFNGQ8NES3 379 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 SRSF12Q8WXF0 261 aaKnown RBP10.61□□□□□ -0.71
ACER3-201ENST00000278544 MALSU1Q96EH3 234 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 SMIM8Q96KF7 97 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 PARP11Q9NR21 331 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 ZNF355PQ9NSJ1 428 aa10.61□□□□□ -0.71
ACER3-201ENST00000278544 IGHV4-59P01825 116 aa10.6□□□□□ -0.71
ACER3-201ENST00000278544 FGF2P09038 288 aa10.6□□□□□ -0.71
ACER3-201ENST00000278544 LGALS7P47929 136 aa10.6□□□□□ -0.71
ACER3-201ENST00000278544 MRGPRG-AS1Q2M3A8 158 aa10.6□□□□□ -0.71
ACER3-201ENST00000278544 HSPB9Q9BQS6 159 aa10.6□□□□□ -0.71
ACER3-201ENST00000278544 FOXA2Q9Y261 457 aaPredicted RBP10.6□□□□□ -0.71
ACER3-201ENST00000278544 TRAV20A0A0B4J274 112 aa10.6□□□□□ -0.71
ACER3-201ENST00000278544 ATP6V1G1O75348 118 aa10.6□□□□□ -0.71
ACER3-201ENST00000278544 SNRPCP09234 159 aaKnown RBP10.6□□□□□ -0.71
ACER3-201ENST00000278544 FAM106CPP0CH98 169 aa10.6□□□□□ -0.71
ACER3-201ENST00000278544 LOXL1Q08397 574 aaPredicted RBP10.6□□□□□ -0.71
ACER3-201ENST00000278544 HABP2Q14520 560 aaPredicted RBP10.6□□□□□ -0.71
ACER3-201ENST00000278544 Q6ZS46 218 aa10.6□□□□□ -0.71
ACER3-201ENST00000278544 VSTM2AQ8TAG5 236 aa10.6□□□□□ -0.71
ACER3-201ENST00000278544 PLA2G2EQ9NZK7 142 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms