RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 FOXJ2Q9P0K8 574 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 KIAA1549Q9HCM3 1950 aa6.82□□□□□ -1.32
LIMD1-201ENST00000273317 A8MXK9 166 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 FXYD3Q14802 87 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 SMRP1Q8NCR6 262 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 PLXNA3P51805 1871 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 A0A0J9YW62 118 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 A0A1B0GUT8 65 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 FHL5Q5TD97 284 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 DMRTA1Q5VZB9 504 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 CYP2G1PQ6ZSU1 146 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 PRR7Q8TB68 274 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 RTN4RQ9BZR6 473 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 GOLT1AQ6ZVE7 132 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 TRBV20OR9-2A0A075B6H5 130 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 CBLN1P23435 193 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 TMPRSS3P57727 454 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 SUMO2P61956 95 aaKnown RBP6.81□□□□□ -1.32
LIMD1-201ENST00000273317 OR4X2Q8NGF9 303 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 TMEM54Q969K7 222 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 CITED1Q99966 193 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 MGAMO43451 1857 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 IGKV3D-15A0A087WSY6 115 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 RRHO14718 337 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 IGKV3-15P01624 115 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 HOXA5P20719 270 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 SLC25A53Q5H9E4 307 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 LURAP1LQ8IV03 231 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 ZNF784Q8NCA9 323 aaPredicted RBP6.81□□□□□ -1.32
LIMD1-201ENST00000273317 IZUMO1RA6ND01 250 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 PEX7O00628 323 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 IGHV4-34P06331 123 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 PLAURQ03405 335 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 RTN4RL2Q86UN3 420 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 HILPDAQ9Y5L2 63 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 PF4V1P10720 104 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 CACNG8Q8WXS5 425 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 SDHCQ99643 169 aaPredicted RBP6.81□□□□□ -1.32
LIMD1-201ENST00000273317 TIMP4Q99727 224 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 TM2D1Q9BX74 207 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 C11orf68Q9H3H3 251 aaKnown RBP6.81□□□□□ -1.32
LIMD1-201ENST00000273317 TNCP24821 2201 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 TMEM14DPA8MWL7 114 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 SYNGR3O43761 229 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 CEACAM4O75871 244 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 NUTF2P61970 127 aaKnown RBP6.81□□□□□ -1.32
LIMD1-201ENST00000273317 LINC00470Q9BZP3 86 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 CCL4P13236 92 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 SSTR5P35346 364 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 OR5A1Q8NGJ0 315 aa6.81□□□□□ -1.32
LIMD1-201ENST00000273317 OSR1Q8TAX0 266 aaPredicted RBP6.81□□□□□ -1.32
LIMD1-201ENST00000273317 COX6B1P14854 86 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 NPPCP23582 126 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 CRYBB3P26998 211 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 NIT1Q86X76 327 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 LOC105371242A0A075B767 164 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 UNC119Q13432 240 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 PMS2CLQ68D20 193 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 C1orf122Q6ZSJ8 110 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 MUC4Q99102 2169 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 TRAV12-3A0A0B4J271 114 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 B9A039 149 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 SNAI2O43623 268 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 CKS1BP61024 79 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 FUT5Q11128 374 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 ASPHD2Q6ICH7 369 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 FAM159AQ6UWV7 190 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 RPP25Q9BUL9 199 aaKnown RBP6.8□□□□□ -1.32
LIMD1-201ENST00000273317 YAE1D1Q9NRH1 226 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 CCL8P80075 99 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 IGLV3-21P80748 117 aaPredicted RBP6.8□□□□□ -1.32
LIMD1-201ENST00000273317 TMEM52Q8NDY8 209 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 A0A1W2PP11 408 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 LINC00305Q7Z4B0 112 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 WDYHV1Q96HA8 205 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 CTAG1AP78358 180 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 TBR1Q16650 682 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 NABP2Q9BQ15 211 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 OPN3Q9H1Y3 402 aaPredicted RBP6.8□□□□□ -1.32
LIMD1-201ENST00000273317 KLK15Q9H2R5 256 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 SIPA1L1O43166 1804 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 FOXD3Q9UJU5 478 aaPredicted RBP6.8□□□□□ -1.32
LIMD1-201ENST00000273317 GRIFINA4D1Z8 144 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 ZNF324BQ6AW86 544 aaPredicted RBP6.8□□□□□ -1.32
LIMD1-201ENST00000273317 RNASEH2CQ8TDP1 164 aaKnown RBP6.8□□□□□ -1.32
LIMD1-201ENST00000273317 BIVMQ86UB2 503 aa6.8□□□□□ -1.32
LIMD1-201ENST00000273317 A0A0G2JLM5 398 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 CENPVL1A0A0U1RR11 272 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 TMEM229AB2RXF0 380 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 SFTA2Q6UW10 78 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 TTC9CQ8N5M4 171 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 MRAPQ8TCY5 172 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 FAM90A9PA6NNJ1 464 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 ZG16O60844 167 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 IL6RP08887 468 aaPredicted RBP6.79□□□□□ -1.32
LIMD1-201ENST00000273317 KLF14Q8TD94 323 aaPredicted RBP6.79□□□□□ -1.32
LIMD1-201ENST00000273317 SCGB3A1Q96QR1 104 aa6.79□□□□□ -1.32
LIMD1-201ENST00000273317 RBMY1BA6NDE4 496 aaKnown RBP6.79□□□□□ -1.32
LIMD1-201ENST00000273317 RBMY1EA6NEQ0 496 aaKnown RBP6.79□□□□□ -1.32
LIMD1-201ENST00000273317 RBMY1DP0C7P1 496 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms