RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 C1orf162Q8NEQ5 155 aaPredicted RBP10.38□□□□□ -0.75
UBXN4-201ENST00000272638 PRNDQ9UKY0 176 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 INSIG2Q9Y5U4 225 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HIST1H2BKO60814 126 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 IGKV1-16P04430 117 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HIST1H2BJP06899 126 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 IL6RP08887 468 aaPredicted RBP10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HIST1H2BOP23527 126 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HIST1H2BBP33778 126 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HIST1H2BDP58876 126 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HIST1H2BCP62807 126 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HIST2H2BEQ16778 126 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.38□□□□□ -0.75
UBXN4-201ENST00000272638 TCF23Q7RTU1 214 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 KIR3DL3Q8N743 410 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 NPIPB3Q92617 1050 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HIST1H2BHQ93079 126 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HIST1H2BNQ99877 126 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HIST1H2BMQ99879 126 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 GGACTQ9BVM4 153 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 IGHV3-35A0A0C4DH35 117 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 B4DEV8 164 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 LINC00869P0C866 280 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 LYZP61626 148 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HEPN1Q6WQI6 88 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 MIR17HGQ75NE6 70 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 C11orf53Q8IXP5 236 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 HELTA6NFD8 242 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 CXorf1O96002 111 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 MSMPQ1L6U9 139 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 TMEM14EPQ6UXP3 125 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 PQLC2Q6ZP29 291 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 OR2T6Q8NHC8 308 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 TMEM18Q96B42 140 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 ADTRPQ96IZ2 230 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 SSBP3Q9BWW4 388 aaPredicted RBP10.37□□□□□ -0.75
UBXN4-201ENST00000272638 SLC25A5P05141 298 aaKnown RBP10.37□□□□□ -0.75
UBXN4-201ENST00000272638 RND2P52198 227 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 ARF6P62330 175 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 RPL8P62917 257 aaKnown RBP10.37□□□□□ -0.75
UBXN4-201ENST00000272638 DAZAP2Q15038 168 aaPredicted RBP10.37□□□□□ -0.75
UBXN4-201ENST00000272638 UTF1Q5T230 341 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 OR1L8Q8NGR8 309 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 OR9G1Q8NH87 305 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 CMTM2Q8TAZ6 248 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 NABP2Q9BQ15 211 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 SLC45A2Q9UMX9 530 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 CHD3Q12873 2000 aaKnown RBP10.37□□□□□ -0.75
UBXN4-201ENST00000272638 TRAV34A0A0B4J273 112 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 ASPHD1Q5U4P2 390 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 PRR7Q8TB68 274 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 SFXN3Q9BWM7 321 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 ZNF331Q9NQX6 463 aaPredicted RBP10.37□□□□□ -0.75
UBXN4-201ENST00000272638 PTPN13Q12923 2485 aa10.37□□□□□ -0.75
UBXN4-201ENST00000272638 TRBV6-6A0A0A6YYG2 114 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 CXorf65A6NEN9 183 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 CBLN1P23435 193 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 KIR2DS2P43631 304 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 SEPSECSQ9HD40 501 aaKnown RBP10.36□□□□□ -0.75
UBXN4-201ENST00000272638 CPAMD8Q8IZJ3 1885 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 LOC400499M0QZD8 3231 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 CEACAM1P13688 526 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 AGAP20933 346 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 KRTCAP3Q53RY4 240 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 FAM90A2PQ658T7 463 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 OR8I2Q8N0Y5 310 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 Q8NFD4 153 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 OR5AU1Q8NGC0 362 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 C15orf62A8K5M9 175 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 SNURFLB1AK76 121 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 CD81P60033 236 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 TREML4Q6UXN2 200 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 TOMM20LQ6UXN7 152 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 FAM57AQ8TBR7 257 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 DMDP11532 3685 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 C5orf52A6NGY3 159 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.36□□□□□ -0.75
UBXN4-201ENST00000272638 FOXH1O75593 365 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 SAA1P0DJI8 122 aaPredicted RBP10.36□□□□□ -0.75
UBXN4-201ENST00000272638 COL8A2P25067 703 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 CDX1P47902 265 aaPredicted RBP10.36□□□□□ -0.75
UBXN4-201ENST00000272638 SRSF7Q16629 238 aaKnown RBP eCLIP10.36□□□□□ -0.75
UBXN4-201ENST00000272638 GSN-AS1Q9NRJ2 163 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 TECRQ9NZ01 308 aaKnown RBP10.36□□□□□ -0.75
UBXN4-201ENST00000272638 FAM215AQ9Y5M1 114 aa10.36□□□□□ -0.75
UBXN4-201ENST00000272638 ZFYVE26Q68DK2 2539 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 MS4A10Q96PG2 267 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 METTL1Q9UBP6 276 aaKnown RBP10.35□□□□□ -0.75
UBXN4-201ENST00000272638 DKK4Q9UBT3 224 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 IGHV3OR16-8A0A075B7F1 116 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 C17orf100A8MU93 164 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 GCHFRP30047 84 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 MMDQ15546 238 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 CYP2G1PQ6ZSU1 146 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 C1QL4Q86Z23 238 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 OR5B3Q8NH48 314 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 P2RX4Q99571 388 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 PDE6DO43924 150 aa10.35□□□□□ -0.75
UBXN4-201ENST00000272638 CNN1P51911 297 aaKnown RBP10.35□□□□□ -0.75
UBXN4-201ENST00000272638 FAM209BQ5JX69 171 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms