RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 OR4C12Q96R67 309 aa16.67■□□□□ 0.26
LYSMD2-201ENST00000267838 BUB1B-PAK6H3BSN5 160 aa16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 PDLIM4P50479 330 aa16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 ARL16Q0P5N6 197 aa16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 PNKDQ8N490 385 aa16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 CYB561D1Q8N8Q1 229 aa16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 LHX4Q969G2 390 aa16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 FLYWCH2Q96CP2 140 aaKnown RBP16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 FOXA2Q9Y261 457 aaPredicted RBP16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 WASHC3Q9Y3C0 194 aa16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 LY86O95711 162 aa16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 ZFP36P26651 326 aaKnown RBP16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 OR4P4Q8NGL7 312 aa16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 HARBI1Q96MB7 349 aa16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 TMEM14BQ9NUH8 114 aa16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 AMMECR1Q9Y4X0 333 aaPredicted RBP16.66■□□□□ 0.26
LYSMD2-201ENST00000267838 UPK2O00526 184 aa16.65■□□□□ 0.26
LYSMD2-201ENST00000267838 MC5RP33032 325 aa16.65■□□□□ 0.26
LYSMD2-201ENST00000267838 DLK1P80370 383 aa16.65■□□□□ 0.26
LYSMD2-201ENST00000267838 SERF2P84101 59 aa16.65■□□□□ 0.26
LYSMD2-201ENST00000267838 OR4C13Q8NGP0 309 aa16.65■□□□□ 0.26
LYSMD2-201ENST00000267838 NANPQ8TBE9 248 aa16.65■□□□□ 0.26
LYSMD2-201ENST00000267838 MBD3L1Q8WWY6 194 aa16.65■□□□□ 0.26
LYSMD2-201ENST00000267838 BET1LQ9NYM9 111 aa16.65■□□□□ 0.26
LYSMD2-201ENST00000267838 TCF19Q9Y242 345 aa16.65■□□□□ 0.26
LYSMD2-201ENST00000267838 SAA1P0DJI8 122 aaPredicted RBP16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 COX6B1P14854 86 aa16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 CEBPGP53567 150 aa16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 PNRC1Q12796 327 aaPredicted RBP16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 KIR3DL3Q8N743 410 aa16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 PRNDQ9UKY0 176 aa16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 TET2Q6N021 2002 aaPredicted RBP16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 UBR5O95071 2799 aaPredicted RBP16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 ENSAO43768 121 aaKnown RBP16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 PRTN3P24158 256 aa16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 HSPE1P61604 102 aaKnown RBP16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 LMO4P61968 165 aa16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 OR8G2PQ6IF36 304 aa16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 RBMS3Q6XE24 437 aaKnown RBP16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 C1orf122Q6ZSJ8 110 aa16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 LILRB2Q8N423 598 aa16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 PINX1Q96BK5 328 aaKnown RBP16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 TMPRSS5Q9H3S3 457 aa16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 ARHGAP32A7KAX9 2087 aa16.64■□□□□ 0.25
LYSMD2-201ENST00000267838 SPTAN1Q13813 2472 aaKnown RBP16.63■□□□□ 0.25
LYSMD2-201ENST00000267838 IFNA1P01562 189 aa16.63■□□□□ 0.25
LYSMD2-201ENST00000267838 BCL2P10415 239 aa16.63■□□□□ 0.25
LYSMD2-201ENST00000267838 VDAC2P45880 294 aaPredicted RBP16.63■□□□□ 0.25
LYSMD2-201ENST00000267838 RPS10P46783 165 aaKnown RBP16.63■□□□□ 0.25
LYSMD2-201ENST00000267838 RPS16P62249 146 aaKnown RBP16.63■□□□□ 0.25
LYSMD2-201ENST00000267838 SLC38A11Q08AI6 406 aa16.63■□□□□ 0.25
LYSMD2-201ENST00000267838 ZNF787Q6DD87 383 aa16.63■□□□□ 0.25
LYSMD2-201ENST00000267838 OR11H6Q8NGC7 330 aa16.63■□□□□ 0.25
LYSMD2-201ENST00000267838 P2RX4Q99571 388 aa16.63■□□□□ 0.25
LYSMD2-201ENST00000267838 OR51B2Q9Y5P1 312 aa16.63■□□□□ 0.25
LYSMD2-201ENST00000267838 A1L4Q6 167 aa16.62■□□□□ 0.25
LYSMD2-201ENST00000267838 PMS2P5A8MQ11 134 aa16.62■□□□□ 0.25
LYSMD2-201ENST00000267838 LCN2P80188 198 aa16.62■□□□□ 0.25
LYSMD2-201ENST00000267838 KIAA0141Q14154 515 aaPredicted RBP16.62■□□□□ 0.25
LYSMD2-201ENST00000267838 LRRC75BQ2VPJ9 315 aa16.62■□□□□ 0.25
LYSMD2-201ENST00000267838 SLC16A13Q7RTY0 426 aa16.62■□□□□ 0.25
LYSMD2-201ENST00000267838 HEYLQ9NQ87 328 aaPredicted RBP16.62■□□□□ 0.25
LYSMD2-201ENST00000267838 INSIG2Q9Y5U4 225 aa16.62■□□□□ 0.25
LYSMD2-201ENST00000267838 IGHV1-3A0A0C4DH29 117 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 LY6LH3BQJ8 138 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 TGOLN2O43493 480 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 KBTBD11O94819 623 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 PAX2Q02962 417 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 RPEQ96AT9 228 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 GNG13Q9P2W3 67 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 ZNF257Q9Y2Q1 563 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 TIMM9Q9Y5J7 89 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 IGHV3-72A0A0B4J1Y9 119 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 C15orf62A8K5M9 175 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 RPP30P78346 268 aaKnown RBP16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 ELOBQ15370 118 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 TMEM41BQ5BJD5 291 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 HCP5Q6MZN7 132 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 OR10P1Q8NGE3 313 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 FAM168AQ92567 244 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 PIMREGQ9BSJ6 248 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 RPRMQ9NS64 109 aa16.61■□□□□ 0.25
LYSMD2-201ENST00000267838 IGLV2-23P01705 113 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 FABP1P07148 127 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 MYOD1P15172 320 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 ATP5J2P56134 94 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 KLRD1Q13241 179 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 PMS2P11Q13670 270 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 VMO1Q7Z5L0 202 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 MOB3BQ86TA1 216 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 VSTM2AQ8TAG5 236 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 RSG1Q9BU20 258 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 TMEM242Q9NWH2 141 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 FKBP11Q9NYL4 201 aa16.6■□□□□ 0.25
LYSMD2-201ENST00000267838 IGHV2-70DA0A0C4DH43 119 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 CLN5O75503 358 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 IFNA10P01566 189 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 HTR1DP28221 377 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 ATP6V1FQ16864 119 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 OR4A5Q8NH83 315 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms