RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 DBX1A6NMT0 343 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 DUS4LO95620 317 aaKnown RBP12.88□□□□□ -0.35
SNRPF-201ENST00000266735 TRAPPC2P0DI81 140 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 TRAPPC2BP0DI82 140 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 APELAP0DMC3 54 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 PF4V1P10720 104 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 IZUMO4Q1ZYL8 232 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 PLET1Q6UQ28 207 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 LYZL2Q7Z4W2 148 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 TTC9CQ8N5M4 171 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 OR5T1Q8NG75 326 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 FAM110DQ8TAY7 271 aaPredicted RBP12.88□□□□□ -0.35
SNRPF-201ENST00000266735 GPR146Q96CH1 333 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 SLA2Q9H6Q3 261 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 NDUFA4L2Q9NRX3 87 aa12.88□□□□□ -0.35
SNRPF-201ENST00000266735 NPIPB5A8MRT5 1133 aa12.87□□□□□ -0.35
SNRPF-201ENST00000266735 BRI3O95415 125 aa12.87□□□□□ -0.35
SNRPF-201ENST00000266735 HSPE1P61604 102 aaKnown RBP12.87□□□□□ -0.35
SNRPF-201ENST00000266735 NMSQ5H8A3 153 aa12.87□□□□□ -0.35
SNRPF-201ENST00000266735 KHDC1LQ5JSQ8 128 aa12.87□□□□□ -0.35
SNRPF-201ENST00000266735 PDCD10Q9BUL8 212 aa12.87□□□□□ -0.35
SNRPF-201ENST00000266735 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.87□□□□□ -0.35
SNRPF-201ENST00000266735 TMED3Q9Y3Q3 217 aa12.87□□□□□ -0.35
SNRPF-201ENST00000266735 RPLP1P05386 114 aaKnown RBP12.86□□□□□ -0.35
SNRPF-201ENST00000266735 CRYGCP07315 174 aa12.86□□□□□ -0.35
SNRPF-201ENST00000266735 RAB9AP51151 201 aa12.86□□□□□ -0.35
SNRPF-201ENST00000266735 AARDQ4LEZ3 155 aa12.86□□□□□ -0.35
SNRPF-201ENST00000266735 Q6ZRM9 215 aa12.86□□□□□ -0.35
SNRPF-201ENST00000266735 MRPL41Q8IXM3 137 aaKnown RBP12.86□□□□□ -0.35
SNRPF-201ENST00000266735 MYOZ3Q8TDC0 251 aa12.86□□□□□ -0.35
SNRPF-201ENST00000266735 HINT2Q9BX68 163 aa12.86□□□□□ -0.35
SNRPF-201ENST00000266735 KLK15Q9H2R5 256 aa12.86□□□□□ -0.35
SNRPF-201ENST00000266735 ZNF355PQ9NSJ1 428 aa12.86□□□□□ -0.35
SNRPF-201ENST00000266735 COA4Q9NYJ1 87 aa12.86□□□□□ -0.35
SNRPF-201ENST00000266735 CACNG5Q9UF02 275 aa12.86□□□□□ -0.35
SNRPF-201ENST00000266735 CACFD1Q9UGQ2 172 aa12.86□□□□□ -0.35
SNRPF-201ENST00000266735 DNHD1Q96M86 4753 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 IGLC7A0M8Q6 106 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 PTTG1O95997 202 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 DHFRP00374 187 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 IFNA17P01571 189 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 SULT1A3P0DMM9 295 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 SULT1A4P0DMN0 295 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 AREGP15514 252 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 PSMB6P28072 239 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 RPL23AP62750 156 aaKnown RBP12.85□□□□□ -0.35
SNRPF-201ENST00000266735 PRCDQ00LT1 54 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 DCTN2Q13561 401 aaKnown RBP12.85□□□□□ -0.35
SNRPF-201ENST00000266735 HIST2H2BDQ6DRA6 164 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 LCNL1Q6ZST4 164 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 OR52E5Q8NH55 327 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 ZNF431Q8TF32 576 aaPredicted RBP12.85□□□□□ -0.35
SNRPF-201ENST00000266735 MITD1Q8WV92 249 aa12.85□□□□□ -0.35
SNRPF-201ENST00000266735 A0A1B0GU03 582 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 M0QZ24 198 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 ST8SIA3O43173 380 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 IL5P05113 134 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 CTRB1P17538 263 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 CDX1P47902 265 aaPredicted RBP12.84□□□□□ -0.35
SNRPF-201ENST00000266735 SMCO1Q147U7 214 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 C2orf68Q2NKX9 166 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 CTRB2Q6GPI1 263 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 OR10W1Q8NGF6 305 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 OR52B4Q8NGK2 314 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 UBE2E2Q96LR5 201 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 MS4A10Q96PG2 267 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 MARVELD1Q9BSK0 173 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 PLEKHA3Q9HB20 300 aa12.84□□□□□ -0.35
SNRPF-201ENST00000266735 ADARB2-AS1A8MUL3 147 aa12.83□□□□□ -0.36
SNRPF-201ENST00000266735 INMT-MINDY4F8WBC2 141 aa12.83□□□□□ -0.36
SNRPF-201ENST00000266735 PRAF2O60831 178 aa12.83□□□□□ -0.36
SNRPF-201ENST00000266735 TRGV3P03979 118 aa12.83□□□□□ -0.36
SNRPF-201ENST00000266735 HOXB5P09067 269 aa12.83□□□□□ -0.36
SNRPF-201ENST00000266735 OR13C7P0DN81 318 aa12.83□□□□□ -0.36
SNRPF-201ENST00000266735 SLC25A6P12236 298 aa12.83□□□□□ -0.36
SNRPF-201ENST00000266735 TPPP2P59282 170 aa12.83□□□□□ -0.36
SNRPF-201ENST00000266735 WT1-ASQ06250 92 aa12.83□□□□□ -0.36
SNRPF-201ENST00000266735 NSUN5P1Q3KNT7 163 aa12.83□□□□□ -0.36
SNRPF-201ENST00000266735 PDLIM3Q53GG5 364 aaPredicted RBP12.83□□□□□ -0.36
SNRPF-201ENST00000266735 SEC22CQ9BRL7 303 aa12.83□□□□□ -0.36
SNRPF-201ENST00000266735 A0A1W2PRX2 142 aa12.82□□□□□ -0.36
SNRPF-201ENST00000266735 INS-IGF2F8WCM5 200 aa12.82□□□□□ -0.36
SNRPF-201ENST00000266735 IFNA21P01568 189 aa12.82□□□□□ -0.36
SNRPF-201ENST00000266735 REG1AP05451 166 aa12.82□□□□□ -0.36
SNRPF-201ENST00000266735 DEFA4P12838 97 aa12.82□□□□□ -0.36
SNRPF-201ENST00000266735 SPCS3P61009 180 aa12.82□□□□□ -0.36
SNRPF-201ENST00000266735 KIAA0141Q14154 515 aaPredicted RBP12.82□□□□□ -0.36
SNRPF-201ENST00000266735 GGNBP1Q5YKI7 109 aa12.82□□□□□ -0.36
SNRPF-201ENST00000266735 ZNF491Q8N8L2 437 aa12.82□□□□□ -0.36
SNRPF-201ENST00000266735 GPN1Q9HCN4 374 aaPredicted RBP12.82□□□□□ -0.36
SNRPF-201ENST00000266735 TRBV9A0A0B4J1U6 114 aa12.81□□□□□ -0.36
SNRPF-201ENST00000266735 A0A0G2JLM5 398 aa12.81□□□□□ -0.36
SNRPF-201ENST00000266735 NUDT19A8MXV4 375 aa12.81□□□□□ -0.36
SNRPF-201ENST00000266735 CYB5BO43169 146 aa12.81□□□□□ -0.36
SNRPF-201ENST00000266735 PRH1P02810 166 aa12.81□□□□□ -0.36
SNRPF-201ENST00000266735 HIST1H1BP16401 226 aaKnown RBP12.81□□□□□ -0.36
SNRPF-201ENST00000266735 ERHP84090 104 aaKnown RBP12.81□□□□□ -0.36
SNRPF-201ENST00000266735 KLK9Q2XQG4 91 aa12.81□□□□□ -0.36
SNRPF-201ENST00000266735 KLHL30-AS1Q8NEE0 82 aa12.81□□□□□ -0.36
SNRPF-201ENST00000266735 OR4F17Q8NGA8 305 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms