RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 HSPB7Q9UBY9 170 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 NSG2Q9Y328 171 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 OR51B2Q9Y5P1 312 aa11.18□□□□□ -0.62
SSBP1-201ENST00000265304 NPIPB5A8MRT5 1133 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 G3V318 75 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 H3BUA1 57 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 ST8SIA3O43173 380 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 SOX15O60248 233 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 ELANEP08246 267 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 TRAPPC2P0DI81 140 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 TRAPPC2BP0DI82 140 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 PSMB8P28062 276 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 SPCS3P61009 180 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 CD83Q01151 205 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 ID3Q02535 119 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 FOXE3Q13461 319 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 TATDN3Q17R31 274 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 OR5M8Q8NGP6 311 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 MDFIQ99750 246 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 PARP11Q9NR21 331 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 CACNG5Q9UF02 275 aa11.17□□□□□ -0.62
SSBP1-201ENST00000265304 PSMB11A5LHX3 300 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 ADAP1O75689 374 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 MYOD1P15172 320 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 CTRB1P17538 263 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 KRTAP10-3P60369 221 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 WT1-ASQ06250 92 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 KIAA0141Q14154 515 aaPredicted RBP11.16□□□□□ -0.62
SSBP1-201ENST00000265304 TCTEX1D4Q5JR98 221 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 CTRB2Q6GPI1 263 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 KLHDC1Q8N7A1 406 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 ZNF114Q8NC26 417 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 FAM110DQ8TAY7 271 aaPredicted RBP11.16□□□□□ -0.62
SSBP1-201ENST00000265304 CITED1Q99966 193 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 FAM103A1Q9BTL3 118 aaKnown RBP11.16□□□□□ -0.62
SSBP1-201ENST00000265304 ZNF747Q9BV97 191 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 WSB1Q9Y6I7 421 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 VWFP04275 2813 aa11.16□□□□□ -0.62
SSBP1-201ENST00000265304 TRBV9A0A0B4J1U6 114 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 MPTX1A8MV57 137 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 IFNA21P01568 189 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 HOXB5P09067 269 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 GNB1P62873 340 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 SLC35B1P78383 322 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 TNFRSF9Q07011 255 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 SRSF4Q08170 494 aaKnown RBP11.15□□□□□ -0.62
SSBP1-201ENST00000265304 BSXQ3C1V8 233 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 TEX38Q6PEX7 206 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 UNQ5815/PRO19632Q6UWF5 114 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 CENPVQ7Z7K6 275 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-201ENST00000265304 OR5AU1Q8NGC0 362 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 OR4D5Q8NGN0 318 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 GRPEL2Q8TAA5 225 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 OR10C1Q96KK4 312 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 LINC00527Q9UJ94 153 aa11.15□□□□□ -0.62
SSBP1-201ENST00000265304 ANK2Q01484 3957 aa11.14□□□□□ -0.63
SSBP1-201ENST00000265304 A0A1W2PN81 502 aa11.14□□□□□ -0.63
SSBP1-201ENST00000265304 FBXO24O75426 580 aa11.14□□□□□ -0.63
SSBP1-201ENST00000265304 PSMB6P28072 239 aa11.14□□□□□ -0.63
SSBP1-201ENST00000265304 CHRNA7P36544 502 aa11.14□□□□□ -0.63
SSBP1-201ENST00000265304 C2orf68Q2NKX9 166 aa11.14□□□□□ -0.63
SSBP1-201ENST00000265304 OR2C3Q8N628 320 aa11.14□□□□□ -0.63
SSBP1-201ENST00000265304 OR10W1Q8NGF6 305 aa11.14□□□□□ -0.63
SSBP1-201ENST00000265304 RNASE11Q8TAA1 199 aaKnown RBP11.14□□□□□ -0.63
SSBP1-201ENST00000265304 SLA2Q9H6Q3 261 aa11.14□□□□□ -0.63
SSBP1-201ENST00000265304 HMX3A6NHT5 357 aa11.13□□□□□ -0.63
SSBP1-201ENST00000265304 LY86O95711 162 aa11.13□□□□□ -0.63
SSBP1-201ENST00000265304 AREGP15514 252 aa11.13□□□□□ -0.63
SSBP1-201ENST00000265304 ATP5IP56385 69 aaPredicted RBP11.13□□□□□ -0.63
SSBP1-201ENST00000265304 ARSJQ5FYB0 599 aaPredicted RBP11.13□□□□□ -0.63
SSBP1-201ENST00000265304 C10orf99Q6UWK7 81 aa11.13□□□□□ -0.63
SSBP1-201ENST00000265304 MRPL41Q8IXM3 137 aaKnown RBP11.13□□□□□ -0.63
SSBP1-201ENST00000265304 FANCD2OSQ96PS1 177 aa11.13□□□□□ -0.63
SSBP1-201ENST00000265304 FYTTD1Q96QD9 318 aaKnown RBP11.13□□□□□ -0.63
SSBP1-201ENST00000265304 ZFP57Q9NU63 452 aa11.13□□□□□ -0.63
SSBP1-201ENST00000265304 ALG5Q9Y673 324 aa11.13□□□□□ -0.63
SSBP1-201ENST00000265304 OPN1MWP04001 364 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 OPN1MW2P0DN77 364 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 OPN1MW3P0DN78 364 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 OR13C7P0DN81 318 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 RAB9AP51151 201 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 ECSCRQ19T08 205 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 CXorf66Q5JRM2 361 aaPredicted RBP11.12□□□□□ -0.63
SSBP1-201ENST00000265304 ZNF329Q86UD4 541 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 ZBTB8BQ8NAP8 495 aaPredicted RBP11.12□□□□□ -0.63
SSBP1-201ENST00000265304 OR1L6Q8NGR2 347 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 OR1P1Q8NH06 330 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 C2orf50Q96LR7 162 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 KLK15Q9H2R5 256 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 DMRT1Q9Y5R6 373 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 NOTCH3Q9UM47 2321 aa11.12□□□□□ -0.63
SSBP1-201ENST00000265304 PKD1L1Q8TDX9 2849 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 IGLV11-55A0A075B6I3 123 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 ADARB2-AS1A8MUL3 147 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 RBMXL2O75526 392 aaKnown RBP11.11□□□□□ -0.63
SSBP1-201ENST00000265304 IFNA17P01571 189 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 CDX1P47902 265 aaPredicted RBP11.11□□□□□ -0.63
SSBP1-201ENST00000265304 RUNX1Q01196 453 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 IAH1Q2TAA2 248 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms