RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 RAB19A4D1S5 217 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 YIF1AO95070 293 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 SPP1P10451 314 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 PAX9P55771 341 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 B2MP61769 119 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 CR1LQ2VPA4 569 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 ACSM6Q6P461 480 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 C7orf69Q9H7B7 122 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 RPRMQ9NS64 109 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 C1RLQ9NZP8 487 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 SNAPINO95295 136 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 RBP4P02753 201 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 CDC34P49427 236 aaPredicted RBP7.58□□□□□ -1.2
SSR3-201ENST00000265044 SERF2P84101 59 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 ARL16Q0P5N6 197 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 LHFPL4Q7Z7J7 247 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 RASL11BQ9BPW5 248 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 A0A1W2PPR1 153 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 SFTA3P0C7M3 94 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 FAM106CPP0CH98 169 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 DVL1P1P54792 670 aaPredicted RBP7.58□□□□□ -1.2
SSR3-201ENST00000265044 MIC13Q5XKP0 118 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 ZNF843Q8N446 348 aa7.58□□□□□ -1.2
SSR3-201ENST00000265044 BBC3Q96PG8 261 aaPredicted RBP7.58□□□□□ -1.2
SSR3-201ENST00000265044 FAM103A1Q9BTL3 118 aaKnown RBP7.58□□□□□ -1.2
SSR3-201ENST00000265044 ZNF430Q9H8G1 570 aaPredicted RBP7.58□□□□□ -1.2
SSR3-201ENST00000265044 SRRM4A7MD48 611 aaKnown RBP7.57□□□□□ -1.2
SSR3-201ENST00000265044 PRTN3P24158 256 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 PPP1R27Q86WC6 154 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 NANPQ8TBE9 248 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 TEX50A0A1B0GTY4 177 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 ATF4P18848 351 aaPredicted RBP7.57□□□□□ -1.2
SSR3-201ENST00000265044 LRRC75BQ2VPJ9 315 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 UQCC3Q6UW78 93 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 OR2T10Q8NGZ9 312 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 OR4F5Q8NH21 305 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 IGFBPL1Q8WX77 278 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 OR4F4Q96R69 305 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 TOLLIPQ9H0E2 274 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 TMEM218A2RU14 115 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 SCGB2A1O75556 95 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 TGFAP01135 160 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 FAM78BQ5VT40 261 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 ZNF833PQ6ZTB9 187 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 RPUSD4Q96CM3 377 aaKnown RBP7.57□□□□□ -1.2
SSR3-201ENST00000265044 BET1LQ9NYM9 111 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 PXMP4Q9Y6I8 212 aa7.57□□□□□ -1.2
SSR3-201ENST00000265044 RBFOX3A6NFN3 312 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 MFSD2BA6NFX1 497 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 COX7A2P2O60397 106 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 IGHV4-39P01824 125 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 ORM2P19652 201 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 ZP3P21754 424 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 OR10J1P30954 320 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 KIAA0141Q14154 515 aaPredicted RBP7.56□□□□□ -1.2
SSR3-201ENST00000265044 FXYD3Q14802 87 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 ECSCRQ19T08 205 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 TMEM41BQ5BJD5 291 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 TMEM14EPQ6UXP3 125 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 COMMD1Q8N668 190 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 MAPK1IP1LQ8NDC0 245 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 ZNF439Q8NDP4 499 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 OR5AN1Q8NGI8 311 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 NIPSNAP3BQ9BS92 247 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 AUP1Q9Y679 476 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 NOTCH3Q9UM47 2321 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 NAV3Q8IVL0 2385 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 TRAV40A0A0B4J280 105 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 M0R1W7 72 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 LY6EQ16553 131 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 CLEC12BQ2HXU8 276 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 TPTE2P1Q5T6R2 138 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 ETFRF1Q6IPR1 90 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 ZNF429Q86V71 674 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 GAB2Q9UQC2 676 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 KPTNQ9Y664 436 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 FAM90A9PA6NNJ1 464 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 MOSP00540 346 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 AKR1C3P42330 323 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 RND2P52198 227 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 BRWD1-AS2P59051 145 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 PRCDQ00LT1 54 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 TMEM88Q6PEY1 159 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 BRD3OSQ6XYD6 125 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 C1orf229Q6ZS94 237 aaPredicted RBP7.56□□□□□ -1.2
SSR3-201ENST00000265044 ODF3L1Q8IXM7 274 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 NPCDR1Q9BY65 106 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 MED9Q9NWA0 146 aa7.56□□□□□ -1.2
SSR3-201ENST00000265044 FOXA2Q9Y261 457 aaPredicted RBP7.56□□□□□ -1.2
SSR3-201ENST00000265044 SNRPCP09234 159 aaKnown RBP7.55□□□□□ -1.2
SSR3-201ENST00000265044 CNTFRP26992 372 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 OR52E5Q8NH55 327 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 NPIPB3Q92617 1050 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 GNB4Q9HAV0 340 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 TMEM177Q53S58 311 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 C11orf71Q6IPW1 123 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 LINC00311Q8N616 119 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 RPH3ALQ9UNE2 315 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 ANKRD17O75179 2603 aaKnown RBP7.55□□□□□ -1.2
SSR3-201ENST00000265044 COL12A1Q99715 3063 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms