RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 FAM27E3Q08E93 113 aa12.77□□□□□ -0.37
NID1-201ENST00000264187 TMEM42Q69YG0 159 aa12.77□□□□□ -0.37
NID1-201ENST00000264187 IFNL4K9M1U5 179 aa12.77□□□□□ -0.37
NID1-201ENST00000264187 FBLN7Q53RD9 439 aa12.77□□□□□ -0.37
NID1-201ENST00000264187 C1QL2Q7Z5L3 287 aa12.77□□□□□ -0.37
NID1-201ENST00000264187 SLC25A15Q9Y619 301 aa12.77□□□□□ -0.37
NID1-201ENST00000264187 SLC25A45Q8N413 288 aa12.77□□□□□ -0.37
NID1-201ENST00000264187 RNASE7Q9H1E1 156 aaKnown RBP12.77□□□□□ -0.37
NID1-201ENST00000264187 C21orf62Q9NYP8 219 aa12.77□□□□□ -0.37
NID1-201ENST00000264187 FAM89BQ8N5H3 189 aa12.76□□□□□ -0.37
NID1-201ENST00000264187 VCX2Q9H322 139 aa12.76□□□□□ -0.37
NID1-201ENST00000264187 SDF2L1Q9HCN8 221 aa12.76□□□□□ -0.37
NID1-201ENST00000264187 LHX2P50458 406 aa12.76□□□□□ -0.37
NID1-201ENST00000264187 UNQ9370/PRO34162Q6UXP9 181 aa12.76□□□□□ -0.37
NID1-201ENST00000264187 C11orf44Q8N8P7 122 aa12.76□□□□□ -0.37
NID1-201ENST00000264187 OR5P3Q8WZ94 311 aa12.76□□□□□ -0.37
NID1-201ENST00000264187 HIGD1CA8MV81 97 aa12.76□□□□□ -0.37
NID1-201ENST00000264187 C3orf36Q3SXR2 165 aa12.76□□□□□ -0.37
NID1-201ENST00000264187 PHLDA1Q8WV24 401 aaPredicted RBP12.76□□□□□ -0.37
NID1-201ENST00000264187 Q9H3A6 140 aa12.76□□□□□ -0.37
NID1-201ENST00000264187 ANAPC13Q9BS18 74 aa12.76□□□□□ -0.37
NID1-201ENST00000264187 DIDO1Q9BTC0 2240 aaKnown RBP12.76□□□□□ -0.37
NID1-201ENST00000264187 PGPEP1LA6NFU8 196 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 EVI2AP22794 236 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 CD24P25063 80 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 ORMDL3Q8N138 153 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 LRTM2Q8N967 370 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 PILRAQ9UKJ1 303 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 C12orf77C9JDV5 145 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.75□□□□□ -0.37
NID1-201ENST00000264187 PRR31Q5SQ13 230 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 FHL5Q5TD97 284 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 C4orf51C9J302 202 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 SAXO1Q8IYX7 474 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 GSN-AS1Q9NRJ2 163 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 TRIP11Q15643 1979 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 COX6A1P12074 109 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 TDGF1P3P51864 188 aa12.75□□□□□ -0.37
NID1-201ENST00000264187 SRSF4Q08170 494 aaKnown RBP12.75□□□□□ -0.37
NID1-201ENST00000264187 IGKV1D-42A0A075B6H8 117 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 ARPC1AQ92747 370 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 SCN1AP35498 2009 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 VENTXO95231 258 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 RAMP1O60894 148 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 SERF1AO75920 110 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 SRD5A1P18405 259 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 PSMG3Q9BT73 122 aaPredicted RBP12.74□□□□□ -0.37
NID1-201ENST00000264187 MRPL20Q9BYC9 149 aaKnown RBP12.74□□□□□ -0.37
NID1-201ENST00000264187 ZNF257Q9Y2Q1 563 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 MPTX1A8MV57 137 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 HBDP02042 147 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 EFNB1P98172 346 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 ZNF585BQ52M93 769 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 OR13A1Q8NGR1 328 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 OR2K2Q8NGT1 345 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 DPM3Q9P2X0 92 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 RGPD1P0DJD0 1748 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 SMCHD1A6NHR9 2005 aa12.74□□□□□ -0.37
NID1-201ENST00000264187 B9A039 149 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 CELA3AP09093 270 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 FMC1Q96HJ9 113 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 ZNF415Q09FC8 603 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 LHFPL4Q7Z7J7 247 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 ACP7Q6ZNF0 438 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 TOPAZ1Q8N9V7 1692 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 TMEM14DPA8MWL7 114 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 IFI27P40305 119 aaPredicted RBP12.73□□□□□ -0.37
NID1-201ENST00000264187 SRSF6Q13247 344 aaKnown RBP12.73□□□□□ -0.37
NID1-201ENST00000264187 OR4X2Q8NGF9 303 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 EFEMP2O95967 443 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 STHQ8IWL8 128 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 PRDM13Q9H4Q3 707 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 C7orf69Q9H7B7 122 aa12.73□□□□□ -0.37
NID1-201ENST00000264187 TBX6O95947 436 aaPredicted RBP12.72□□□□□ -0.37
NID1-201ENST00000264187 RTN4RL2Q86UN3 420 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 C5orf30Q96GV9 206 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 COQ2Q96H96 371 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 NRN1Q9NPD7 142 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 LAMA4Q16363 1823 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 TRAV8-4A0A0B4J246 113 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 RFPL3SP0C7P2 107 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 APOBEC3AP31941 199 aaPredicted RBP12.72□□□□□ -0.37
NID1-201ENST00000264187 EGR4Q05215 589 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 ST20Q9HBF5 79 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 CD33P20138 364 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 LAMTOR2Q9Y2Q5 125 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 CEP290O15078 2479 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 SCN9AQ15858 1988 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 SRP19P09132 144 aaKnown RBP12.72□□□□□ -0.37
NID1-201ENST00000264187 ZNF703Q9H7S9 590 aaPredicted RBP12.72□□□□□ -0.37
NID1-201ENST00000264187 A0A0G2JLM5 398 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 CD8AP01732 235 aa12.72□□□□□ -0.37
NID1-201ENST00000264187 C1orf162Q8NEQ5 155 aaPredicted RBP12.72□□□□□ -0.37
NID1-201ENST00000264187 MAST2Q6P0Q8 1798 aa12.71□□□□□ -0.37
NID1-201ENST00000264187 ADMP35318 185 aa12.71□□□□□ -0.37
NID1-201ENST00000264187 UCP3P55916 312 aa12.71□□□□□ -0.37
NID1-201ENST00000264187 RNF182Q8N6D2 247 aa12.71□□□□□ -0.37
NID1-201ENST00000264187 FDCSPQ8NFU4 85 aa12.71□□□□□ -0.37
NID1-201ENST00000264187 GDF15Q99988 308 aa12.71□□□□□ -0.37
NID1-201ENST00000264187 IZUMO1RA6ND01 250 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms