RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 LRBAP50851 2863 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 SAA2-SAA4A0A096LPE2 208 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 SAA2P0DJI9 122 aaPredicted RBP13.59□□□□□ -0.23
ZNF541-201ENST00000263351 HOXC12P31275 282 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 TNFSF10P50591 281 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 LCN2P80188 198 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 CT45A1Q5HYN5 189 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 MORN5Q5VZ52 161 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 CT45A3Q8NHU0 189 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 NEU1Q99519 415 aa13.59□□□□□ -0.23
ZNF541-201ENST00000263351 DCHS2Q6V1P9 2916 aa13.58□□□□□ -0.23
ZNF541-201ENST00000263351 IGKV1-16P04430 117 aa13.58□□□□□ -0.24
ZNF541-201ENST00000263351 OR4A47Q6IF82 309 aa13.58□□□□□ -0.24
ZNF541-201ENST00000263351 INO80CQ6PI98 192 aaPredicted RBP13.58□□□□□ -0.24
ZNF541-201ENST00000263351 OR1L6Q8NGR2 347 aa13.58□□□□□ -0.24
ZNF541-201ENST00000263351 LINC00479Q96M42 142 aa13.58□□□□□ -0.24
ZNF541-201ENST00000263351 S1PR3Q99500 378 aa13.58□□□□□ -0.24
ZNF541-201ENST00000263351 LRFN3Q9BTN0 628 aa13.58□□□□□ -0.24
ZNF541-201ENST00000263351 DSCAML1Q8TD84 2053 aa13.58□□□□□ -0.24
ZNF541-201ENST00000263351 PRB4P10163 310 aaPredicted RBP13.58□□□□□ -0.24
ZNF541-201ENST00000263351 FOXL1Q12952 345 aa13.58□□□□□ -0.24
ZNF541-201ENST00000263351 RND1Q92730 232 aa13.58□□□□□ -0.24
ZNF541-201ENST00000263351 RCHY1Q96PM5 261 aa13.58□□□□□ -0.24
ZNF541-201ENST00000263351 OR2V2Q96R30 315 aa13.58□□□□□ -0.24
ZNF541-201ENST00000263351 LSM4Q9Y4Z0 139 aaKnown RBP13.58□□□□□ -0.24
ZNF541-201ENST00000263351 SNURFLB1AK76 121 aa13.57□□□□□ -0.24
ZNF541-201ENST00000263351 FCN1O00602 326 aa13.57□□□□□ -0.24
ZNF541-201ENST00000263351 CXorf1O96002 111 aa13.57□□□□□ -0.24
ZNF541-201ENST00000263351 PSG5Q15238 335 aa13.57□□□□□ -0.24
ZNF541-201ENST00000263351 C22orf34Q6ZV56 151 aa13.57□□□□□ -0.24
ZNF541-201ENST00000263351 LYG1Q8N1E2 194 aa13.57□□□□□ -0.24
ZNF541-201ENST00000263351 RYDENQ9NUL5 291 aaKnown RBP13.57□□□□□ -0.24
ZNF541-201ENST00000263351 ERVFC1-1P60608 527 aa13.57□□□□□ -0.24
ZNF541-201ENST00000263351 PQLC2Q6ZP29 291 aa13.57□□□□□ -0.24
ZNF541-201ENST00000263351 OR10W1Q8NGF6 305 aa13.57□□□□□ -0.24
ZNF541-201ENST00000263351 PRR7Q8TB68 274 aa13.57□□□□□ -0.24
ZNF541-201ENST00000263351 ZNF503Q96F45 646 aa13.57□□□□□ -0.24
ZNF541-201ENST00000263351 TRAV5A0A0B4J249 113 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 C19orf67A6NJJ6 358 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 SRRM4A7MD48 611 aaKnown RBP13.56□□□□□ -0.24
ZNF541-201ENST00000263351 IRF2P14316 349 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 ERVK-16P61578 105 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 C1orf194Q5T5A4 169 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 ZCCHC14Q8WYQ9 949 aaKnown RBP13.56□□□□□ -0.24
ZNF541-201ENST00000263351 RAB1CQ92928 201 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 FER1L6-AS2Q96M78 137 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 RAI1Q7Z5J4 1906 aaPredicted RBP13.56□□□□□ -0.24
ZNF541-201ENST00000263351 CRISP2P16562 243 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 NPY1RP25929 384 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 CCKARP32238 428 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 SSBP2P81877 361 aaPredicted RBP13.56□□□□□ -0.24
ZNF541-201ENST00000263351 CENPWQ5EE01 88 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 TPTE2P1Q5T6R2 138 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 SLC24A4Q8NFF2 622 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 EAF1Q96JC9 268 aaPredicted RBP13.56□□□□□ -0.24
ZNF541-201ENST00000263351 CALYQ9NYX4 217 aa13.56□□□□□ -0.24
ZNF541-201ENST00000263351 YPEL1O60688 119 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 TFPI2P48307 235 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 HTD2P86397 168 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 C17orf58Q2M2W7 97 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 MRPL54Q6P161 138 aaKnown RBP13.55□□□□□ -0.24
ZNF541-201ENST00000263351 MMD2Q8IY49 270 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 BEND2Q8NDZ0 799 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 OR9G1Q8NH87 305 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 ITLN1Q8WWA0 313 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 YPEL2Q96QA6 119 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 PARD6AQ9NPB6 346 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 TMEM106BQ9NUM4 274 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 FBXL7Q9UJT9 491 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 KIR2DL5BA0A0G2JN68 375 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 KIR2DL5BA0A0G2JPC4 375 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 ADH4P08319 380 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 ZNF25P17030 456 aaPredicted RBP13.55□□□□□ -0.24
ZNF541-201ENST00000263351 TDGF1P3P51864 188 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 BAGE3Q86Y29 109 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 BAGE2Q86Y30 109 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 KIR2DL5AQ8N109 375 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 ZCCHC24Q8N2G6 241 aaKnown RBP13.55□□□□□ -0.24
ZNF541-201ENST00000263351 DDB2Q92466 427 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 SGK494Q96LW2 274 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 SSBP3Q9BWW4 388 aaPredicted RBP13.55□□□□□ -0.24
ZNF541-201ENST00000263351 NPVFQ9HCQ7 196 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 GCM1Q9NP62 436 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 IDI2-AS1Q9NZ38 188 aa13.55□□□□□ -0.24
ZNF541-201ENST00000263351 ASH1LQ9NR48 2969 aaKnown RBP13.55□□□□□ -0.24
ZNF541-201ENST00000263351 SRRM5B3KS81 715 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 LINC00869P0C866 280 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 COMPP49747 757 aaPredicted RBP13.54□□□□□ -0.24
ZNF541-201ENST00000263351 TEPPQ6URK8 271 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 FAM168AQ92567 244 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 UHRF2Q96PU4 802 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 GNB4Q9HAV0 340 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 IL36BQ9NZH7 164 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 V9GYV3 84 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 ANKRD11Q6UB99 2663 aaPredicted RBP13.54□□□□□ -0.24
ZNF541-201ENST00000263351 C15orf61A6NNL5 157 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 M0R1B8 84 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 LGALS4P56470 323 aa13.54□□□□□ -0.24
ZNF541-201ENST00000263351 YPEL3P61236 119 aaPredicted RBP13.54□□□□□ -0.24
ZNF541-201ENST00000263351 GUSBP1Q15486 140 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms