RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 HPRT1P00492 218 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 IGKV1-16P04430 117 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 TAS2R30P59541 319 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 ICAM4Q14773 271 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 SPSB3Q6PJ21 355 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 OR4A16Q8NH70 328 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 PIGBOS1A0A0B4J2F0 54 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 HMGB3O15347 200 aaKnown RBP11.11□□□□□ -0.63
VMP1-201ENST00000262291 FGF8P55075 233 aaPredicted RBP11.11□□□□□ -0.63
VMP1-201ENST00000262291 ERVK-16P61578 105 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 PMS2P11Q13670 270 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 OR1P1Q8NH06 330 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 ZNF714Q96N38 554 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 STRAPQ9Y3F4 350 aaKnown RBP11.11□□□□□ -0.63
VMP1-201ENST00000262291 LINC00312Q9Y6C7 94 aa11.11□□□□□ -0.63
VMP1-201ENST00000262291 B9A039 149 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 DEFA4P12838 97 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 RAB7AP51149 207 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 LRRC10Q5BKY1 277 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 TMEM14EPQ6UXP3 125 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 SSX7Q7RTT5 188 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 MRPL41Q8IXM3 137 aaKnown RBP11.1□□□□□ -0.63
VMP1-201ENST00000262291 LFNGQ8NES3 379 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 DDB2Q92466 427 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 TCF21O43680 179 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 RAB11AP62491 216 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 HBG1P69891 147 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 HBG2P69892 147 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 TFF3Q07654 80 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 PRSS8Q16651 343 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 LCN15Q6UWW0 184 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 ABHD12Q8N2K0 398 aa11.1□□□□□ -0.63
VMP1-201ENST00000262291 GNPNAT1Q96EK6 184 aaPredicted RBP11.1□□□□□ -0.63
VMP1-201ENST00000262291 TGOLN2O43493 480 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 RPLP1P05386 114 aaKnown RBP11.09□□□□□ -0.63
VMP1-201ENST00000262291 CT45A6P0DMU7 189 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 CT45A5P0DMU8 189 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 CT45A7P0DMV0 189 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 LOXP28300 417 aaPredicted RBP11.09□□□□□ -0.63
VMP1-201ENST00000262291 ZNF672Q499Z4 452 aaPredicted RBP11.09□□□□□ -0.63
VMP1-201ENST00000262291 MRPL20Q9BYC9 149 aaKnown RBP11.09□□□□□ -0.63
VMP1-201ENST00000262291 PRORYQ9H606 182 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 RPRMQ9NS64 109 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 CACNA1AO00555 2505 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 FAM90A26D6RGX4 464 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 RELBQ01201 579 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 OR4S2Q8NH73 311 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 RNASEH2CQ8TDP1 164 aaKnown RBP11.09□□□□□ -0.63
VMP1-201ENST00000262291 CORO2AQ92828 525 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 ELOVL1Q9BW60 279 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 ACACBO00763 2458 aa11.09□□□□□ -0.63
VMP1-201ENST00000262291 SRRM4A7MD48 611 aaKnown RBP11.08□□□□□ -0.64
VMP1-201ENST00000262291 TNFRSF13BO14836 293 aaPredicted RBP11.08□□□□□ -0.64
VMP1-201ENST00000262291 TFPI2P48307 235 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 ERVFC1-1P60608 527 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 COTL1Q14019 142 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 FBXL19-AS1Q494R0 122 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 OR4A47Q6IF82 309 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 SLC25A48Q6ZT89 311 aaKnown RBP11.08□□□□□ -0.64
VMP1-201ENST00000262291 HEYLQ9NQ87 328 aaPredicted RBP11.08□□□□□ -0.64
VMP1-201ENST00000262291 LAMP3Q9UQV4 416 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 C15orf62A8K5M9 175 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 RRHO14718 337 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 CD33P20138 364 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 EFNB3Q15768 340 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 LRRC75BQ2VPJ9 315 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 TCTEX1D1Q8N7M0 179 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 WDR61Q9GZS3 305 aaKnown RBP11.08□□□□□ -0.64
VMP1-201ENST00000262291 GAL3ST2Q9H3Q3 398 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 NCOR1P1Q9H4R4 102 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 PMS2P5A8MQ11 134 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 CLDN34H7C241 214 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 PLXNB1O43157 2135 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 ETFRF1Q6IPR1 90 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 SSX8Q7RTT4 187 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 IGFBPL1Q8WX77 278 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 TMEM37Q8WXS4 190 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 TAF15Q92804 592 aaKnown RBP eCLIP11.08□□□□□ -0.64
VMP1-201ENST00000262291 RCC1LQ96I51 464 aaKnown RBP11.08□□□□□ -0.64
VMP1-201ENST00000262291 SLC35D1Q9NTN3 355 aa11.08□□□□□ -0.64
VMP1-201ENST00000262291 IGHV3-72A0A0B4J1Y9 119 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 GNLYP22749 145 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 ZNF726P1Q15940 193 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 OR10P1Q8NGE3 313 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 RAB9BQ9NP90 201 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 GNG13Q9P2W3 67 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 ZFP92A6NM28 416 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 GCGP01275 180 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 THBS3P49746 956 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 OR5I1Q13606 314 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 OR10A7Q8NGE5 316 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 OR10X1Q8NGY0 326 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 KIAA1456Q9P272 454 aa11.07□□□□□ -0.64
VMP1-201ENST00000262291 POLR3KQ9Y2Y1 108 aaPredicted RBP11.07□□□□□ -0.64
VMP1-201ENST00000262291 CFAP46Q8IYW2 2715 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 SVEP1Q4LDE5 3571 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 A0A1B0GW64 132 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 A0A1W2PPR1 153 aa11.06□□□□□ -0.64
VMP1-201ENST00000262291 IGKV1D-33P01593 117 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms