RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 COL25A1Q9BXS0 654 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-201ENST00000254630 TNFRSF18Q9Y5U5 241 aa7.33□□□□□ -1.24
PTCD3-201ENST00000254630 ZNF837Q96EG3 531 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-201ENST00000254630 C18orf12Q96KH6 178 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 LINC01587Q99440 93 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 C2orf88Q9BSF0 95 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 WNT10AQ9GZT5 417 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 ANK1P16157 1881 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 GCSAMLQ5JQS6 135 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 PLPPR1Q8TBJ4 325 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 MRAP2Q96G30 205 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 JMJD8Q96S16 334 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 RTBDNQ9BSG5 229 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-201ENST00000254630 REPIN1Q9BWE0 567 aaKnown RBP7.32□□□□□ -1.24
PTCD3-201ENST00000254630 GPR61Q9BZJ8 451 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 PLSCR2Q9NRY7 297 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 C21orf62Q9NYP8 219 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 NBR2O15453 112 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 JOSD1Q15040 202 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-201ENST00000254630 WDR82Q6UXN9 313 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 DEPPQ9NTK1 212 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 ATG2BQ96BY7 2078 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 IGLV3-32A0A0A0MS00 114 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 PRB3Q04118 309 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-201ENST00000254630 PMCHL1Q16048 86 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 ZNF418Q8TF45 676 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-201ENST00000254630 H7C1H1 209 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 NTN3O00634 580 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-201ENST00000254630 IGFBP3P17936 291 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-201ENST00000254630 ZNF497Q6ZNH5 498 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 SEMA5BQ9P283 1151 aa7.32□□□□□ -1.24
PTCD3-201ENST00000254630 F11RQ9Y624 299 aaKnown RBP7.32□□□□□ -1.24
PTCD3-201ENST00000254630 GREB1Q4ZG55 1949 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 CGAP01215 116 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 FOLR2P14207 255 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 SCN8AQ9UQD0 1980 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 PLXNA3P51805 1871 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 PEX7O00628 323 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 STHQ8IWL8 128 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 MARVELD3Q96A59 401 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 PMCHL2Q9BQD1 86 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 ZNF256Q9Y2P7 627 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-201ENST00000254630 NMBP08949 121 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 SAA1P0DJI8 122 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-201ENST00000254630 NSUN5P1Q3KNT7 163 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 CD8AP01732 235 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 OTX1P32242 354 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-201ENST00000254630 TMEM136Q6ZRR5 245 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 SCO2A0A1W2PP80 73 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 TCRBV4S1A1TA0A5B7 111 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 E9PLN8 166 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 TFF1P04155 84 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 DSCR9P59020 149 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 VKORC1Q9BQB6 163 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 PRSS22Q9GZN4 317 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 Q9H3A6 140 aa7.31□□□□□ -1.24
PTCD3-201ENST00000254630 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 ZNF506Q5JVG8 444 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 GATAD1Q8WUU5 269 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 NPFFR1Q9GZQ6 430 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 CXorf65A6NEN9 183 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 SAMD13Q5VXD3 122 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 TMEM70Q9BUB7 260 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 UPK2O00526 184 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 CCL3L1P16619 93 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 HINT1P49773 126 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-201ENST00000254630 C2orf68Q2NKX9 166 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 LDLRAD2Q5SZI1 272 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 LAIR2Q6ISS4 152 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 ERASQ7Z444 233 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 TMEM133Q9H2Q1 129 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 YPEL1O60688 119 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 IGHV3-11P01762 117 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 FABP2P12104 132 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 MIR17HGQ75NE6 70 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 VMO1Q7Z5L0 202 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 YPEL2Q96QA6 119 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 RPP21Q9H633 154 aaKnown RBP7.3□□□□□ -1.24
PTCD3-201ENST00000254630 OR52E5Q8NH55 327 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 OTORQ9NRC9 128 aa7.3□□□□□ -1.24
PTCD3-201ENST00000254630 M0R381 172 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 FHITP49789 147 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 EMP1P54849 157 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 SUMO2P61956 95 aaKnown RBP7.29□□□□□ -1.24
PTCD3-201ENST00000254630 PUSL1Q8N0Z8 303 aaKnown RBP7.29□□□□□ -1.24
PTCD3-201ENST00000254630 IL36BQ9NZH7 164 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 PSMB11A5LHX3 300 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 MSGN1A6NI15 193 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 NPIPB7O75200 414 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 LYPD3O95274 346 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 NBEAP1P0C6P0 100 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 COL5A1-AS1Q5SY13 56 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 DMRTA2Q96SC8 542 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 RPRMQ9NS64 109 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 METRNQ9UJH8 293 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 C15orf61A6NNL5 157 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 LINC00271P0C7V0 271 aa7.29□□□□□ -1.24
PTCD3-201ENST00000254630 GPX4P36969 197 aaPredicted RBP7.29□□□□□ -1.24
PTCD3-201ENST00000254630 MORN2Q502X0 79 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms