RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 UBE2G2P60604 165 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 ARSJQ5FYB0 599 aaPredicted RBP12.94□□□□□ -0.34
LRFN1-201ENST00000248668 OR4A47Q6IF82 309 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 OR5T1Q8NG75 326 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 SSMEM1Q8WWF3 244 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 HIPK2Q9H2X6 1198 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 IDI2-AS1Q9NZ38 188 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 SLC25A10Q9UBX3 287 aaPredicted RBP12.94□□□□□ -0.34
LRFN1-201ENST00000248668 ABCA1O95477 2261 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 HNF1AP20823 631 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 TFPI2P48307 235 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 OR5I1Q13606 314 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 ATP6V1FQ16864 119 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 FAM122AQ96E09 287 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 VAX2Q9UIW0 290 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 RAB7AP51149 207 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 RPL31P62899 125 aaKnown RBP12.93□□□□□ -0.34
LRFN1-201ENST00000248668 C3orf36Q3SXR2 165 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 LYPD2Q6UXB3 125 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 TNFRSF1AP19438 455 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 MAS1LP35410 378 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 CD81P60033 236 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 C16orf54Q6UWD8 224 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 NUP37Q8NFH4 326 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 OR4F5Q8NH21 305 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 TMEM170AQ8WVE7 144 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 ZCCHC14Q8WYQ9 949 aaKnown RBP12.93□□□□□ -0.34
LRFN1-201ENST00000248668 DDB2Q92466 427 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 OR4F4Q96R69 305 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 PIEZO1Q92508 2521 aa12.93□□□□□ -0.34
LRFN1-201ENST00000248668 MALRD1Q5VYJ5 2156 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 LOC102724200A0A096LPH7 203 aaPredicted RBP12.92□□□□□ -0.34
LRFN1-201ENST00000248668 FCN3O75636 299 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 ADIRFQ15847 76 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 TMEM204Q9BSN7 226 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 MS4A5Q9H3V2 200 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 DYNLRB1Q9NP97 96 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 CTXND1A0A1B0GTU2 59 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 GFRA3O60609 400 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 PAGE4O60829 102 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 SCGB1D1O95968 90 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 DLX1P56177 255 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 MIC13Q5XKP0 118 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 SMIM7Q9BQ49 75 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 ELOA3CA0A087WX78 387 aaPredicted RBP12.92□□□□□ -0.34
LRFN1-201ENST00000248668 IFNA1P01562 189 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 FAM210BQ96KR6 192 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 ACTR3CQ9C0K3 210 aaPredicted RBP12.92□□□□□ -0.34
LRFN1-201ENST00000248668 TIMM9Q9Y5J7 89 aa12.92□□□□□ -0.34
LRFN1-201ENST00000248668 SIAH2O43255 324 aa12.91□□□□□ -0.34
LRFN1-201ENST00000248668 GNB2P62879 340 aa12.91□□□□□ -0.34
LRFN1-201ENST00000248668 MEF2BQ02080 365 aaPredicted RBP12.91□□□□□ -0.34
LRFN1-201ENST00000248668 NECAP1Q8NC96 275 aa12.91□□□□□ -0.34
LRFN1-201ENST00000248668 AURKAIP1Q9NWT8 199 aaPredicted RBP12.91□□□□□ -0.34
LRFN1-201ENST00000248668 NKX6-3A6NJ46 265 aa12.91□□□□□ -0.34
LRFN1-201ENST00000248668 SRRM4A7MD48 611 aaKnown RBP12.91□□□□□ -0.34
LRFN1-201ENST00000248668 AMBPP02760 352 aa12.91□□□□□ -0.34
LRFN1-201ENST00000248668 VDAC2P45880 294 aaPredicted RBP12.91□□□□□ -0.34
LRFN1-201ENST00000248668 JOSD1Q15040 202 aaPredicted RBP12.91□□□□□ -0.34
LRFN1-201ENST00000248668 MRPL41Q8IXM3 137 aaKnown RBP12.91□□□□□ -0.34
LRFN1-201ENST00000248668 PARD6GQ9BYG4 376 aaPredicted RBP12.91□□□□□ -0.34
LRFN1-201ENST00000248668 NAV3Q8IVL0 2385 aa12.91□□□□□ -0.34
LRFN1-201ENST00000248668 CACNA1BQ00975 2339 aa12.91□□□□□ -0.34
LRFN1-201ENST00000248668 FAM90A27PA6NNH2 459 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 LYNX1G3V0Z9 82 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 LYNX1P0DP58 116 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 CDC34P49427 236 aaPredicted RBP12.9□□□□□ -0.34
LRFN1-201ENST00000248668 TREML4Q6UXN2 200 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 LINC01560Q8TB33 94 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 ELOVL5Q9NYP7 299 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 hADV38S2A0JD32 116 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 ZNF705FA8MVS1 300 aaPredicted RBP12.9□□□□□ -0.34
LRFN1-201ENST00000248668 PLAUP00749 431 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 ZNF705DP0CH99 300 aaPredicted RBP12.9□□□□□ -0.34
LRFN1-201ENST00000248668 ZNF705BP0CI00 300 aaPredicted RBP12.9□□□□□ -0.34
LRFN1-201ENST00000248668 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 PAX1P15863 534 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 PSMB3P49720 205 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 DIAPH2-AS1Q14236 149 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 SLC35E3Q7Z769 313 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 ZNF439Q8NDP4 499 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 OR5R1Q8NH85 324 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 SLC35D1Q9NTN3 355 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 RPUSD1Q9UJJ7 312 aaKnown RBP12.9□□□□□ -0.34
LRFN1-201ENST00000248668 C15orf61A6NNL5 157 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 C17orf112F2Z3M2 114 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 K7ENP7 123 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 RBFOX2O43251 390 aaKnown RBP eCLIP12.9□□□□□ -0.34
LRFN1-201ENST00000248668 PDLIM3Q53GG5 364 aaPredicted RBP12.9□□□□□ -0.34
LRFN1-201ENST00000248668 MOB3BQ86TA1 216 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 Q8N7P7 452 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 OR13D1Q8NGV5 346 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 DIRC2Q96SL1 478 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
LRFN1-201ENST00000248668 WDR83OSQ9Y284 106 aa12.9□□□□□ -0.34
LRFN1-201ENST00000248668 GRNP28799 593 aaKnown RBP12.89□□□□□ -0.35
LRFN1-201ENST00000248668 THBS3P49746 956 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 CST9LP1Q5W188 147 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms