RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 EIF3GO75821 320 aaKnown RBP eCLIP18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 CA2P00918 260 aa18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 HBE1P02100 147 aa18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 COX7A1P24310 79 aa18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 NPY1RP25929 384 aa18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 IL3RAP26951 378 aa18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 NPBWR1P48145 328 aa18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 PDLIM4P50479 330 aa18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 LMO4P61968 165 aa18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 FAM74A3Q4VXF1 159 aa18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 BEND2Q8NDZ0 799 aa18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 LOC105371242A0A075B767 164 aa18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 IGHV3-72A0A0B4J1Y9 119 aa18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 NUPL2O15504 423 aaKnown RBP18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 PRRX1P54821 245 aa18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 ARF6P62330 175 aa18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 LCN2P80188 198 aa18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 LCN15Q6UWW0 184 aa18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 TREML4Q6UXN2 200 aa18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 OR4P4Q8NGL7 312 aa18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 OR5B3Q8NH48 314 aa18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 C1orf159Q96HA4 380 aa18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 ENY2Q9NPA8 101 aa18.83■□□□□ 0.6
SYNGR3-201ENST00000248121 ANKRD17O75179 2603 aaKnown RBP18.82■□□□□ 0.6
SYNGR3-201ENST00000248121 PLXNB1O43157 2135 aa18.82■□□□□ 0.6
SYNGR3-201ENST00000248121 IFNA4P05014 189 aa18.82■□□□□ 0.6
SYNGR3-201ENST00000248121 HAGHQ16775 308 aa18.82■□□□□ 0.6
SYNGR3-201ENST00000248121 TMEM167AQ8TBQ9 72 aa18.82■□□□□ 0.6
SYNGR3-201ENST00000248121 GGACTQ9BVM4 153 aa18.82■□□□□ 0.6
SYNGR3-201ENST00000248121 PLEKHA3Q9HB20 300 aa18.82■□□□□ 0.6
SYNGR3-201ENST00000248121 SIRT7Q9NRC8 400 aa18.82■□□□□ 0.6
SYNGR3-201ENST00000248121 E7EUB6 86 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 RAB13P51153 203 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 FGF8P55075 233 aaPredicted RBP18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 RAB11AP62491 216 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 DLK1P80370 383 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 FKBP11Q9NYL4 201 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 ABCA12Q86UK0 2595 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 MC5RP33032 325 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 RPL8P62917 257 aaKnown RBP18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 MRGPRG-AS1Q2M3A8 158 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 LDLRAD2Q5SZI1 272 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 C10orf105Q8TEF2 133 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 FAM168AQ92567 244 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 KPTNQ9Y664 436 aa18.81■□□□□ 0.6
SYNGR3-201ENST00000248121 IGHV4-30-2A0A087WSY4 118 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 ICAM4Q14773 271 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 ARSJQ5FYB0 599 aaPredicted RBP18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 FFAR4Q5NUL3 377 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 PNKDQ8N490 385 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 OR10W1Q8NGF6 305 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 SLC35B3Q9H1N7 401 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 NDUFA4L2Q9NRX3 87 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 MAP1AP78559 2803 aaPredicted RBP18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 IGHV4-61A0A0C4DH41 118 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 SMCO3A2RU48 225 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 CGB1A6NKQ9 187 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 SNAPINO95295 136 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 USF1P22415 310 aaPredicted RBP18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 TPSG1Q9NRR2 321 aa18.8■□□□□ 0.6
SYNGR3-201ENST00000248121 IGHV1-3A0A0C4DH29 117 aa18.79■□□□□ 0.6
SYNGR3-201ENST00000248121 LY6LH3BQJ8 138 aa18.79■□□□□ 0.6
SYNGR3-201ENST00000248121 KLRD1Q13241 179 aa18.79■□□□□ 0.6
SYNGR3-201ENST00000248121 BSXQ3C1V8 233 aa18.79■□□□□ 0.6
SYNGR3-201ENST00000248121 ZNF506Q5JVG8 444 aa18.79■□□□□ 0.6
SYNGR3-201ENST00000248121 OR4A5Q8NH83 315 aa18.79■□□□□ 0.6
SYNGR3-201ENST00000248121 SMDT1Q9H4I9 107 aa18.79■□□□□ 0.6
SYNGR3-201ENST00000248121 CSMD1Q96PZ7 3565 aa18.79■□□□□ 0.6
SYNGR3-201ENST00000248121 hCG_1809904A0A1W2PP81 198 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 A0A1W2PPE2 198 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 A0A1W2PR64 198 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 A0A1W2PRV1 198 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 OR13C7P0DN81 318 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 PAX2Q02962 417 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 ZNF709Q8N972 641 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 VSTM2AQ8TAG5 236 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 MGST2Q99735 147 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 ZNF430Q9H8G1 570 aaPredicted RBP18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 LPAR2Q9HBW0 351 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 LSM4Q9Y4Z0 139 aaKnown RBP18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 NAV3Q8IVL0 2385 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 MAP1LC3B2A6NCE7 125 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 VWC2LB2RUY7 222 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 SLC25A17O43808 307 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 C10orf55Q5SWW7 151 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 OR10G4Q8NGN3 311 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 OR10G9Q8NGN4 311 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 OR10G7Q8NGN6 311 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 PIMREGQ9BSJ6 248 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 COMMD5Q9GZQ3 224 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 MAP1LC3BQ9GZQ8 125 aa18.78■□□□□ 0.6
SYNGR3-201ENST00000248121 C17orf112F2Z3M2 114 aa18.77■□□□□ 0.6
SYNGR3-201ENST00000248121 ENSAO43768 121 aaKnown RBP18.77■□□□□ 0.6
SYNGR3-201ENST00000248121 DEFA4P12838 97 aa18.77■□□□□ 0.6
SYNGR3-201ENST00000248121 CLRN3Q8NCR9 226 aa18.77■□□□□ 0.6
SYNGR3-201ENST00000248121 OR1L8Q8NGR8 309 aa18.77■□□□□ 0.6
SYNGR3-201ENST00000248121 PSMG3-AS1Q96PY0 264 aa18.77■□□□□ 0.6
SYNGR3-201ENST00000248121 SLC25A22Q9H936 323 aa18.77■□□□□ 0.6
SYNGR3-201ENST00000248121 GNG13Q9P2W3 67 aa18.77■□□□□ 0.6
SYNGR3-201ENST00000248121 MBP02144 154 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms