RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 SFXN3Q9BWM7 321 aa17.77■□□□□ 0.43
SH2D3A-201ENST00000245908 LINC00574Q9H8X3 128 aa17.77■□□□□ 0.43
SH2D3A-201ENST00000245908 IL6RP08887 468 aaPredicted RBP17.76■□□□□ 0.43
SH2D3A-201ENST00000245908 CHRNA7P36544 502 aa17.76■□□□□ 0.43
SH2D3A-201ENST00000245908 SELENOVP59797 346 aa17.76■□□□□ 0.43
SH2D3A-201ENST00000245908 TEX38Q6PEX7 206 aa17.76■□□□□ 0.43
SH2D3A-201ENST00000245908 LYG1Q8N1E2 194 aa17.76■□□□□ 0.43
SH2D3A-201ENST00000245908 CISD2Q8N5K1 135 aaKnown RBP17.76■□□□□ 0.43
SH2D3A-201ENST00000245908 DLEU1O43261 78 aa17.75■□□□□ 0.43
SH2D3A-201ENST00000245908 LCN2P80188 198 aa17.75■□□□□ 0.43
SH2D3A-201ENST00000245908 TEPPQ6URK8 271 aa17.75■□□□□ 0.43
SH2D3A-201ENST00000245908 SSMEM1Q8WWF3 244 aa17.75■□□□□ 0.43
SH2D3A-201ENST00000245908 ENY2Q9NPA8 101 aa17.75■□□□□ 0.43
SH2D3A-201ENST00000245908 CBLN4Q9NTU7 201 aa17.75■□□□□ 0.43
SH2D3A-201ENST00000245908 GOLT1BQ9Y3E0 138 aa17.75■□□□□ 0.43
SH2D3A-201ENST00000245908 CA2P00918 260 aa17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 CEACAM8P31997 349 aaPredicted RBP17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 TMEM30BQ3MIR4 351 aa17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 ZNF788Q6ZQV5 615 aa17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 MRPL41Q8IXM3 137 aaKnown RBP17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 CORO2AQ92828 525 aa17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 IMMP2LQ96T52 175 aa17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 STPG3Q8N7X2 389 aa17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 ZNF114Q8NC26 417 aa17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 ZCCHC14Q8WYQ9 949 aaKnown RBP17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 CCL13Q99616 98 aa17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 TMEM208Q9BTX3 173 aa17.74■□□□□ 0.43
SH2D3A-201ENST00000245908 FNDC10F2Z333 226 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 TM4SF5O14894 197 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 TNFSF4P23510 183 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 RPL29P47914 159 aaKnown RBP17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 EFNB3Q15768 340 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 TMEM144Q7Z5S9 345 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 DEFB108BQ8NET1 73 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 LINC00614P0C842 121 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 C1QTNF9P0C862 333 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 RHOBP62745 196 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 FAM78BQ5VT40 261 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 C22orf34Q6ZV56 151 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 FAM216BQ8N7L0 139 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 AURKAIP1Q9NWT8 199 aaPredicted RBP17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 PRNDQ9UKY0 176 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 FUT9Q9Y231 359 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 OR51B2Q9Y5P1 312 aa17.73■□□□□ 0.43
SH2D3A-201ENST00000245908 TRBV20OR9-2A0A075B6H5 130 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 RPLP1P05386 114 aaKnown RBP17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 CD40P25942 277 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 IL3RAP26951 378 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 GCHFRP30047 84 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 GNG10P50151 68 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 FAM27E3Q08E93 113 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 RAB31Q13636 194 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 NEUROG1Q92886 237 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 BTF3L4Q96K17 158 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 RPUSD1Q9UJJ7 312 aaKnown RBP17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 SCO2A0A1W2PP80 73 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 MMP23AO75900 390 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 TEX36Q5VZQ5 186 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 SLC25A48Q6ZT89 311 aaKnown RBP17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 GBGT1Q8N5D6 347 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 RBMXL3Q8N7X1 1067 aaKnown RBP17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 CHODLQ9H9P2 273 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 FKBP11Q9NYL4 201 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 ZNF257Q9Y2Q1 563 aa17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 YTHDF2Q9Y5A9 579 aaKnown RBP17.72■□□□□ 0.43
SH2D3A-201ENST00000245908 PGPEP1LA6NFU8 196 aa17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 A8MXE2 369 aa17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 MYOD1P15172 320 aa17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 PRR20EP86478 221 aa17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 PRR20CP86479 221 aa17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 PRR20DP86480 221 aa17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 PRR20BP86481 221 aa17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 PRR20AP86496 221 aa17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 FOXL1Q12952 345 aa17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 SFRP2Q96HF1 295 aa17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 SEPSECSQ9HD40 501 aaKnown RBP17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 POLR3KQ9Y2Y1 108 aaPredicted RBP17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 NBEAQ8NFP9 2946 aa17.71■□□□□ 0.43
SH2D3A-201ENST00000245908 SPATA31B1PQ5VZV4 182 aa17.7■□□□□ 0.42
SH2D3A-201ENST00000245908 TMEM37Q8WXS4 190 aa17.7■□□□□ 0.42
SH2D3A-201ENST00000245908 UPK2O00526 184 aa17.7■□□□□ 0.42
SH2D3A-201ENST00000245908 CT45A6P0DMU7 189 aa17.7■□□□□ 0.42
SH2D3A-201ENST00000245908 CT45A5P0DMU8 189 aa17.7■□□□□ 0.42
SH2D3A-201ENST00000245908 CT45A7P0DMV0 189 aa17.7■□□□□ 0.42
SH2D3A-201ENST00000245908 RPL15P61313 204 aaKnown RBP17.7■□□□□ 0.42
SH2D3A-201ENST00000245908 PRCDQ00LT1 54 aa17.7■□□□□ 0.42
SH2D3A-201ENST00000245908 NUP37Q8NFH4 326 aa17.7■□□□□ 0.42
SH2D3A-201ENST00000245908 FAM57AQ8TBR7 257 aa17.7■□□□□ 0.42
SH2D3A-201ENST00000245908 TMEM204Q9BSN7 226 aa17.7■□□□□ 0.42
SH2D3A-201ENST00000245908 ASPMQ8IZT6 3477 aa17.69■□□□□ 0.42
SH2D3A-201ENST00000245908 DYSFO75923 2080 aa17.69■□□□□ 0.42
SH2D3A-201ENST00000245908 MDFIC2A0A1B0GVS7 189 aa17.69■□□□□ 0.42
SH2D3A-201ENST00000245908 IGFBP2P18065 325 aa17.69■□□□□ 0.42
SH2D3A-201ENST00000245908 HINT2Q9BX68 163 aa17.69■□□□□ 0.42
SH2D3A-201ENST00000245908 CFAP47Q6ZTR5 3102 aa17.69■□□□□ 0.42
SH2D3A-201ENST00000245908 J3QR06 171 aa17.69■□□□□ 0.42
SH2D3A-201ENST00000245908 IRF2P14316 349 aa17.69■□□□□ 0.42
SH2D3A-201ENST00000245908 RTL8BQ17RB0 113 aa17.69■□□□□ 0.42
SH2D3A-201ENST00000245908 PLEKHA3Q9HB20 300 aa17.69■□□□□ 0.42
SH2D3A-201ENST00000245908 SLC35D1Q9NTN3 355 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms