RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 RAMP3O60896 148 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 GOSR1O95249 250 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 NGFP01138 241 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 NPPCP23582 126 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 GDF1P27539 372 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 HES1Q14469 280 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 REPIN1Q9BWE0 567 aaKnown RBP7.79□□□□□ -1.16
SRSF6-201ENST00000244020 NRN1Q9NPD7 142 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 ORM2P19652 201 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 RNPS1Q15287 305 aaKnown RBP7.79□□□□□ -1.16
SRSF6-201ENST00000244020 SPATA46Q5T0L3 261 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 C5orf17Q8NAS9 161 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 ZNF114Q8NC26 417 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 OR10AG1Q8NH19 301 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 HSPB7Q9UBY9 170 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 C7orf71A4D174 169 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 LRRC30A6NM36 301 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 P01737 135 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 S1PR3Q99500 378 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 THYN1Q9P016 225 aa7.79□□□□□ -1.16
SRSF6-201ENST00000244020 MRPS18CQ9Y3D5 142 aaKnown RBP7.79□□□□□ -1.16
SRSF6-201ENST00000244020 TRANK1O15050 2925 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 IGHV3-43A0A0B4J1X8 118 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 IGHV3-43DP0DP04 118 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 CD1BP29016 333 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 MRPL52Q86TS9 123 aaKnown RBP7.78□□□□□ -1.16
SRSF6-201ENST00000244020 CNEP1R1Q8N9A8 125 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 OCC1Q8TAD7 63 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 CRIM1Q9NZV1 1036 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 UFC1Q9Y3C8 167 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 TRAV8-6A0A0B4J262 113 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 A0A1W2PRD5 423 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 A0A1W2PRF3 423 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 A0A1W2PRM7 423 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 GAGE12BA1L429 117 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 A1L4Q6 167 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 M0R3E3 92 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 RBFOX2O43251 390 aaKnown RBP eCLIP7.78□□□□□ -1.168e-16■■■■■ 31.8
SRSF6-201ENST00000244020 S1PR2O95136 353 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 TSPAN13O95857 204 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 SMIM13P0DJ93 91 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 ARL14EPLP0DKL9 152 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 MRPS11P82912 194 aaKnown RBP7.78□□□□□ -1.16
SRSF6-201ENST00000244020 DAZAP2Q15038 168 aaPredicted RBP7.78□□□□□ -1.16
SRSF6-201ENST00000244020 MMD2Q8IY49 270 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 OR1N2Q8NGR9 330 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 KCNE4Q8WWG9 221 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 OR5P3Q8WZ94 311 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 SPAG8Q99932 426 aaPredicted RBP7.78□□□□□ -1.16
SRSF6-201ENST00000244020 SRSF8Q9BRL6 282 aaKnown RBP7.78□□□□□ -1.16
SRSF6-201ENST00000244020 ATG2AQ2TAZ0 1938 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 EML6Q6ZMW3 1958 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 SCO2A0A1W2PP80 73 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 TIMM8AO60220 97 aaPredicted RBP7.78□□□□□ -1.16
SRSF6-201ENST00000244020 MT-ND6P03923 174 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 S100A4P26447 101 aaKnown RBP7.78□□□□□ -1.16
SRSF6-201ENST00000244020 TEX43Q6ZNM6 134 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 LINC00596Q86U02 117 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 SCCPDHQ8NBX0 429 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 OR4S2Q8NH73 311 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 GALMQ96C23 342 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 STRADBQ9C0K7 418 aa7.78□□□□□ -1.16
SRSF6-201ENST00000244020 VSTM5A8MXK1 200 aa7.77□□□□□ -1.16
SRSF6-201ENST00000244020 IGFBP7Q16270 282 aa7.77□□□□□ -1.16
SRSF6-201ENST00000244020 GUSBP11Q6P575 273 aa7.77□□□□□ -1.16
SRSF6-201ENST00000244020 PQLC2Q6ZP29 291 aa7.77□□□□□ -1.16
SRSF6-201ENST00000244020 TEX29Q8N6K0 151 aa7.77□□□□□ -1.16
SRSF6-201ENST00000244020 TNFRSF14Q92956 283 aa7.77□□□□□ -1.16
SRSF6-201ENST00000244020 SPSB4Q96A44 273 aa7.77□□□□□ -1.16
SRSF6-201ENST00000244020 TMEM70Q9BUB7 260 aa7.77□□□□□ -1.16
SRSF6-201ENST00000244020 B4GALT7Q9UBV7 327 aa7.77□□□□□ -1.16
SRSF6-201ENST00000244020 MLNRO43193 412 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 HLA-DQA1P01909 254 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 TIMP3P35625 211 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 CCL7P80098 99 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 IBA57Q5T440 356 aaKnown RBP7.77□□□□□ -1.17
SRSF6-201ENST00000244020 H1FXQ92522 213 aaKnown RBP7.77□□□□□ -1.17
SRSF6-201ENST00000244020 OR2V2Q96R30 315 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 GP6Q9HCN6 339 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 REV3LO60673 3130 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 ZNF716A6NP11 495 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 C2CD4DB7Z1M9 353 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 DNPH1O43598 174 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 IL6RP08887 468 aaPredicted RBP7.77□□□□□ -1.17
SRSF6-201ENST00000244020 MEOX1P50221 254 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 ERHP84090 104 aaKnown RBP7.77□□□□□ -1.17
SRSF6-201ENST00000244020 OCIAD2Q56VL3 154 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 TMEM144Q7Z5S9 345 aa7.77□□□□□ -1.17
SRSF6-201ENST00000244020 PPIAL4EA0A075B759 164 aa7.76□□□□□ -1.17
SRSF6-201ENST00000244020 SH2D1BO14796 132 aa7.76□□□□□ -1.17
SRSF6-201ENST00000244020 PPIAL4FP0DN26 164 aa7.76□□□□□ -1.17
SRSF6-201ENST00000244020 SRD5A2P31213 254 aa7.76□□□□□ -1.17
SRSF6-201ENST00000244020 CEACAM8P31997 349 aaPredicted RBP7.76□□□□□ -1.17
SRSF6-201ENST00000244020 SMIM21Q3B7S5 101 aa7.76□□□□□ -1.17
SRSF6-201ENST00000244020 Q8NFD4 153 aa7.76□□□□□ -1.17
SRSF6-201ENST00000244020 CST9LQ9H4G1 147 aa7.76□□□□□ -1.17
SRSF6-201ENST00000244020 SH2D2AQ9NP31 389 aa7.76□□□□□ -1.17
SRSF6-201ENST00000244020 IL36BQ9NZH7 164 aa7.76□□□□□ -1.17
SRSF6-201ENST00000244020 PSG11Q9UQ72 335 aa7.76□□□□□ -1.17
SRSF6-201ENST00000244020 TMPRSS2O15393 492 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms