RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 WDYHV1Q96HA8 205 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 TBL2Q9Y4P3 447 aaKnown RBP11.54□□□□□ -0.56
NFKB1-201ENST00000226574 S4R3C0 116 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 SMPD2O60906 423 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 SPSB4Q96A44 273 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 INSIG2Q9Y5U4 225 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 IGKV1-6A0A0C4DH72 117 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 MKRN2OSH3BPM6 223 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 MPDU1O75352 247 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 OR4A8P0C604 315 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 FAM87AP0C7U9 286 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 CECR9P0C854 216 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 TNFSF10P50591 281 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 TAS2R60P59551 318 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 RBPJQ06330 500 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 JOSD1Q15040 202 aaPredicted RBP11.54□□□□□ -0.56
NFKB1-201ENST00000226574 ZNF785A8K8V0 405 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 M0QZK8 103 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 GGCTO75223 188 aaKnown RBP11.53□□□□□ -0.56
NFKB1-201ENST00000226574 RPL24P83731 157 aaKnown RBP11.53□□□□□ -0.56
NFKB1-201ENST00000226574 OR4F17Q8NGA8 305 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 PMCHL2Q9BQD1 86 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 SLC25A10Q9UBX3 287 aaPredicted RBP11.53□□□□□ -0.56
NFKB1-201ENST00000226574 TANC1Q9C0D5 1861 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 IGLV3-32A0A0A0MS00 114 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 FAM90A27PA6NNH2 459 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 PCP4P48539 62 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 PLXNA2O75051 1894 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 ADMP35318 185 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 LHX2P50458 406 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 RELBQ01201 579 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 S100A7AQ86SG5 101 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 FAM216BQ8N7L0 139 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 NDUFAF3Q9BU61 184 aa11.53□□□□□ -0.56
NFKB1-201ENST00000226574 SSBP4Q9BWG4 385 aaPredicted RBP11.53□□□□□ -0.56
NFKB1-201ENST00000226574 SEBOXQ9HB31 216 aaPredicted RBP11.53□□□□□ -0.56
NFKB1-201ENST00000226574 CD99P14209 185 aa11.52□□□□□ -0.56
NFKB1-201ENST00000226574 CD82P27701 267 aa11.52□□□□□ -0.56
NFKB1-201ENST00000226574 KIR2DS2P43631 304 aa11.52□□□□□ -0.56
NFKB1-201ENST00000226574 FDCSPQ8NFU4 85 aa11.52□□□□□ -0.56
NFKB1-201ENST00000226574 TMEM191AQ9H0A3 160 aa11.52□□□□□ -0.56
NFKB1-201ENST00000226574 GSX1Q9H4S2 264 aaPredicted RBP11.52□□□□□ -0.56
NFKB1-201ENST00000226574 AAMDCQ9H7C9 122 aa11.52□□□□□ -0.56
NFKB1-201ENST00000226574 PLA2G2EQ9NZK7 142 aa11.52□□□□□ -0.56
NFKB1-201ENST00000226574 DYSFO75923 2080 aa11.52□□□□□ -0.56
NFKB1-201ENST00000226574 PRSS1P07477 247 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 HIST1H1EP10412 219 aaKnown RBP11.52□□□□□ -0.57
NFKB1-201ENST00000226574 COX5BP10606 129 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 PCSK4Q6UW60 755 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 OR8B2Q96RD0 313 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 ALPK3Q96L96 1907 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 MYOD1P15172 320 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 CLDN18P56856 261 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 RPL8P62917 257 aaKnown RBP11.52□□□□□ -0.57
NFKB1-201ENST00000226574 FAM90A2PQ658T7 463 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 ACP7Q6ZNF0 438 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 C5orf17Q8NAS9 161 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 CRIM1Q9NZV1 1036 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 COLQQ9Y215 455 aaPredicted RBP11.52□□□□□ -0.57
NFKB1-201ENST00000226574 KIAA1671Q9BY89 1806 aa11.52□□□□□ -0.57
NFKB1-201ENST00000226574 LNP1A1A4G5 178 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 PPIHO43447 177 aaKnown RBP11.51□□□□□ -0.57
NFKB1-201ENST00000226574 C8orf88P0DMB2 117 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 LYL1P12980 280 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 COL4A3Q01955 1670 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 OR9G9P0C7N8 305 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 ZNF664Q8N3J9 261 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 DNAJC4Q9NNZ3 241 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 IGHV3OR16-8A0A075B7F1 116 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 DPRXA6NFQ7 191 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 IGHV1-2P23083 117 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 KIR3DL3Q8N743 410 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 VSTM2AQ8TAG5 236 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 HILPDAQ9Y5L2 63 aa11.51□□□□□ -0.57
NFKB1-201ENST00000226574 LOC102723996A0A087X1L8 192 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 ORM1P02763 201 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 SPATA31B1PQ5VZV4 182 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 MMDQ15546 238 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 TMEM177Q53S58 311 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 TMEM170AQ8WVE7 144 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 ZCCHC14Q8WYQ9 949 aaKnown RBP11.5□□□□□ -0.57
NFKB1-201ENST00000226574 TNFRSF19Q9NS68 423 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 CHD3Q12873 2000 aaKnown RBP11.5□□□□□ -0.57
NFKB1-201ENST00000226574 TRBV24-1A0A075B6N3 115 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 VENTXO95231 258 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 Q0VFX4 171 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 FAM162BQ5T6X4 162 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 OR4A47Q6IF82 309 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 RAB37Q96AX2 223 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 TRAV3A0A0B4J244 114 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 GNG7O60262 68 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 GNB2P62879 340 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 SLC35E4Q6ICL7 350 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 OR8B3Q8NGG8 313 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 MBD3L1Q8WWY6 194 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 RASL11BQ9BPW5 248 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 LINC00470Q9BZP3 86 aa11.5□□□□□ -0.57
NFKB1-201ENST00000226574 CGB1A6NKQ9 187 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 IFITM10A6NMD0 228 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms