RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 WDR83OSQ9Y284 106 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 NCKAP5O14513 1909 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 EFNB3Q15768 340 aa11.9□□□□□ -0.5
SFXN3-201ENST00000224807 RIPPLY2Q5TAB7 128 aa11.9□□□□□ -0.5
SFXN3-201ENST00000224807 OR2D3Q8NGH3 330 aa11.9□□□□□ -0.5
SFXN3-201ENST00000224807 NAV3Q8IVL0 2385 aa11.9□□□□□ -0.5
SFXN3-201ENST00000224807 YLPM1P49750 1951 aaKnown RBP11.9□□□□□ -0.5
SFXN3-201ENST00000224807 TANC2Q9HCD6 1990 aa11.9□□□□□ -0.5
SFXN3-201ENST00000224807 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.9□□□□□ -0.5
SFXN3-201ENST00000224807 CSN3P07498 182 aa11.9□□□□□ -0.5
SFXN3-201ENST00000224807 ERVK-16P61578 105 aa11.9□□□□□ -0.5
SFXN3-201ENST00000224807 COLCA1Q6ZS62 124 aa11.9□□□□□ -0.5
SFXN3-201ENST00000224807 KIR3DL3Q8N743 410 aa11.9□□□□□ -0.5
SFXN3-201ENST00000224807 DEFB108BQ8NET1 73 aa11.9□□□□□ -0.5
SFXN3-201ENST00000224807 ZNF331Q9NQX6 463 aaPredicted RBP11.9□□□□□ -0.5
SFXN3-201ENST00000224807 HCFC1P51610 2035 aa11.9□□□□□ -0.5
SFXN3-201ENST00000224807 OR5B21A6NL26 309 aa11.9□□□□□ -0.51
SFXN3-201ENST00000224807 APELAP0DMC3 54 aa11.9□□□□□ -0.51
SFXN3-201ENST00000224807 EPHA8P29322 1005 aaPredicted RBP11.9□□□□□ -0.51
SFXN3-201ENST00000224807 LGALS4P56470 323 aa11.9□□□□□ -0.51
SFXN3-201ENST00000224807 FOXF2Q12947 444 aa11.9□□□□□ -0.51
SFXN3-201ENST00000224807 FAM201AQ5SY85 155 aa11.9□□□□□ -0.51
SFXN3-201ENST00000224807 LDLRAD2Q5SZI1 272 aa11.9□□□□□ -0.51
SFXN3-201ENST00000224807 CNEP1R1Q8N9A8 125 aa11.9□□□□□ -0.51
SFXN3-201ENST00000224807 UBE2ZQ9H832 354 aaPredicted RBP11.9□□□□□ -0.51
SFXN3-201ENST00000224807 DUSP13Q9UII6 198 aa11.9□□□□□ -0.51
SFXN3-201ENST00000224807 TRAV5A0A0B4J249 113 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 TDGF1P13385 188 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 SLAQ13239 276 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 TNXAQ16473 311 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 LOXL4Q96JB6 756 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 ENY2Q9NPA8 101 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 PPP1R14DQ9NXH3 145 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 BET1LQ9NYM9 111 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 ZNF324O75467 553 aaPredicted RBP11.89□□□□□ -0.51
SFXN3-201ENST00000224807 CA2P00918 260 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 ZNRD1Q9P1U0 126 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 MPC1Q9Y5U8 109 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 CEP192Q8TEP8 1941 aa11.89□□□□□ -0.51
SFXN3-201ENST00000224807 APCSP02743 223 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 MPV17P39210 176 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 YPEL3P61236 119 aaPredicted RBP11.88□□□□□ -0.51
SFXN3-201ENST00000224807 IBA57Q5T440 356 aaKnown RBP11.88□□□□□ -0.51
SFXN3-201ENST00000224807 ZNF738Q8NE65 137 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 OR8B2Q96RD0 313 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 TACC2O95359 2948 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 hDV102S1A0JD36 115 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 FAM90A26D6RGX4 464 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 BMPR1BO00238 502 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 STAG3L2P0CL84 134 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 STAG3L3P0CL85 134 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 SRFP11831 508 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 TSPOP30536 169 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 ZNF138P52744 262 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 GAGE1Q13065 139 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 OR2T6Q8NHC8 308 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 POLDIP2Q9Y2S7 368 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 TMPRSS2O15393 492 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 MPV17L2Q567V2 206 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 FBXW9Q5XUX1 488 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 COQ2Q96H96 371 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 KCNS1Q96KK3 526 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 CDC42EP3Q9UKI2 254 aa11.88□□□□□ -0.51
SFXN3-201ENST00000224807 PCNX2A6NKB5 2137 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 CD46P15529 392 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 ZNRF1Q8ND25 227 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 TSKUQ8WUA8 353 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 SH2D2AQ9NP31 389 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 KALRNO60229 2985 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 RAB29O14966 203 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 TIMM8AO60220 97 aaPredicted RBP11.87□□□□□ -0.51
SFXN3-201ENST00000224807 RHOBP62745 196 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 ABHD17BQ5VST6 288 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 TCTEX1D1Q8N7M0 179 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 Q8N7P7 452 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 ASCL2Q99929 193 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 V9GYV3 84 aa11.87□□□□□ -0.51
SFXN3-201ENST00000224807 ARR3P36575 388 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 CA7P43166 264 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 BLNKQ8WV28 456 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 RND1Q92730 232 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 TMEM140Q9NV12 185 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 LOC102723996A0A087X1L8 192 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 IGHV3-21A0A0B4J1V1 117 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 LY6G6EA0A0G2JKS1 128 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 SPINT2O43291 252 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 CXCL12P48061 93 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 RBX1P62877 108 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 OR1C1Q15619 314 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 FBLN7Q53RD9 439 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 MOB1BQ7L9L4 216 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 TAAR6Q96RI8 345 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 BOKQ9UMX3 212 aaPredicted RBP11.86□□□□□ -0.51
SFXN3-201ENST00000224807 SLC45A2Q9UMX9 530 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 TCF19Q9Y242 345 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 U3KQA8 63 aa11.86□□□□□ -0.51
SFXN3-201ENST00000224807 PIGBOS1A0A0B4J2F0 54 aa11.85□□□□□ -0.51
SFXN3-201ENST00000224807 CORTO00230 105 aa11.85□□□□□ -0.51
SFXN3-201ENST00000224807 NUDT3O95989 172 aa11.85□□□□□ -0.51
SFXN3-201ENST00000224807 PSG1P11464 419 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms